Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL136139.1-201ENST00000605568 222 ntBASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 RN7SL778P-201ENST00000607160 297 ntBASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 AC010205.1-201ENST00000616668 449 ntBASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 AC103564.3-201ENST00000621194 220 ntBASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 AC074140.1-201ENST00000621617 208 ntBASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 AC138305.3-201ENST00000624988 240 ntBASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.43□□□□□ -1.38
DEPDC4Q8N2C3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC025809.2-201ENST00000625085 1802 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 MIR369-201ENST00000362155 70 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 RN7SKP44-201ENST00000363602 316 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 ARMCX7P-201ENST00000372828 562 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 SNORD116-29-201ENST00000384516 83 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AL606923.1-201ENST00000406616 190 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 HMGN1P24-201ENST00000412282 298 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 OR6C66P-201ENST00000414917 930 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 CBX1P2-201ENST00000453841 458 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 OR7E62P-201ENST00000456741 477 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC008620.1-201ENST00000468453 592 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 RPL37P23-201ENST00000492641 294 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AL139099.1-201ENST00000497398 403 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC116562.3-201ENST00000506136 177 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 HMGB3P15-201ENST00000507326 574 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC005741.1-201ENST00000511094 432 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC068587.5-201ENST00000528506 175 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 TRIM51DP-201ENST00000529746 596 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 FRG2IP-201ENST00000563581 781 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 RN7SL802P-201ENST00000577858 299 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC006270.2-201ENST00000578523 652 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 MIR1273F-201ENST00000580581 99 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AP001521.2-201ENST00000608772 546 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AP001486.3-201ENST00000615334 372 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AL158196.1-201ENST00000616786 434 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC006328.2-201ENST00000623198 397 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AC012005.2-201ENST00000624333 397 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 MTND5P16-201ENST00000460269 1703 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.42□□□□□ -1.38
DEPDC4Q8N2C3 AP001350.1-201ENST00000601906 1524 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 Y_RNA.414-201ENST00000384011 101 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 RPL9P21-201ENST00000392269 505 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 RN7SKP247-201ENST00000411094 308 ntBASIC6.41□□□□□ -1.38
DEPDC4Q8N2C3 AL139135.1-201ENST00000412675 209 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms