Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 RNA5SP116-201ENST00000516132 98 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC022616.3-201ENST00000523940 148 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 ZNF705CP-201ENST00000530515 889 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC093249.1-201ENST00000567049 203 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC092266.1-201ENST00000610958 165 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC092125.1-201ENST00000562568 1995 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 AC006511.3-201ENST00000624929 1783 ntBASIC6.87□□□□□ -1.31
RNF135Q8IUD6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF135Q8IUD6 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 KPNA2P2-201ENST00000419546 1489 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 RBPJP2-201ENST00000618187 1444 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 MTND4P35-201ENST00000604257 1375 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 ZNF652P1-201ENST00000442420 1309 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 RNA5SP65-201ENST00000363166 119 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 SNORA38B-201ENST00000363524 131 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 Y_RNA.146-201ENST00000363549 102 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 RNY1P12-201ENST00000364251 105 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 EIF5P1-201ENST00000400019 1231 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 SRIP2-201ENST00000428470 166 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AL161636.2-201ENST00000445179 927 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 RNU7-63P-201ENST00000459054 62 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 MRPS17P3-201ENST00000465453 385 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC026254.2-201ENST00000475295 371 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC233702.1-201ENST00000482905 502 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 RPL38P4-201ENST00000502376 214 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC060775.1-201ENST00000518241 520 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 SOD1P3-201ENST00000518682 454 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC008055.1-201ENST00000547032 609 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC010591.1-201ENST00000603941 649 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC090971.5-201ENST00000621102 293 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 CLCA3P-203ENST00000490028 2781 ntBASIC6.86□□□□□ -1.31
RNF135Q8IUD6 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF135Q8IUD6 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF135Q8IUD6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF135Q8IUD6 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF135Q8IUD6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF135Q8IUD6 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF135Q8IUD6 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms