Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
C11orf88Q6PI97 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC025031.4-201ENST00000621248 3271 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AL592494.2-201ENST00000425455 1548 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 RPL23P2-201ENST00000320371 421 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 RNU1-43P-201ENST00000365052 165 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 SNORA2.3-201ENST00000383920 135 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 MIR16-1-201ENST00000385271 89 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 SNORD96B-201ENST00000386148 79 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 MT-TC-201ENST00000387405 66 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 HDGFP1-201ENST00000405943 252 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 DUTP5-201ENST00000406790 469 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 VDAC1P9-201ENST00000412766 841 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AL139128.1-201ENST00000413921 941 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 DDX39BP1-205ENST00000422507 192 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 FABP7P1-201ENST00000424004 391 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC068287.1-201ENST00000430283 295 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC000041.1-201ENST00000439655 175 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AL050341.1-201ENST00000447743 313 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 HMGN1P5-201ENST00000448591 263 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 RPL9P32-201ENST00000464118 620 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 RNF138P1-201ENST00000502765 546 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 RN7SKP260-201ENST00000516907 149 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 RNA5SP373-201ENST00000517271 95 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 OR4A46P-201ENST00000527255 933 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC010735.1-201ENST00000567305 1026 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 MIR4700-201ENST00000578311 74 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC006270.2-201ENST00000578523 652 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AP001542.2-201ENST00000593141 364 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC002487.1-201ENST00000604565 994 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC005377.1-201ENST00000605126 456 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC023043.4-201ENST00000612081 449 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AC093875.1-201ENST00000623688 504 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 CYP4F35P-202ENST00000636121 390 ntBASIC4.22□□□□□ -1.73
C11orf88Q6PI97 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C11orf88Q6PI97 AL136520.1-201ENST00000600311 1322 ntBASIC4.21□□□□□ -1.73
C11orf88Q6PI97 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.21□□□□□ -1.73
C11orf88Q6PI97 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.21□□□□□ -1.73
C11orf88Q6PI97 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
C11orf88Q6PI97 RNVU1-3-201ENST00000364313 161 ntBASIC4.21□□□□□ -1.74
C11orf88Q6PI97 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
C11orf88Q6PI97 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
C11orf88Q6PI97 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
C11orf88Q6PI97 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
C11orf88Q6PI97 AL603865.2-201ENST00000401679 213 ntBASIC4.21□□□□□ -1.74
C11orf88Q6PI97 NUDT19P3-201ENST00000404698 555 ntBASIC4.21□□□□□ -1.74
C11orf88Q6PI97 RNA5SP146-201ENST00000410743 123 ntBASIC4.21□□□□□ -1.74
C11orf88Q6PI97 P2RY10P2-201ENST00000416730 913 ntBASIC4.21□□□□□ -1.74
C11orf88Q6PI97 EIF4HP2-201ENST00000424380 563 ntBASIC4.21□□□□□ -1.74
C11orf88Q6PI97 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.21□□□□□ -1.74
C11orf88Q6PI97 RPL12P3-201ENST00000440080 396 ntBASIC4.21□□□□□ -1.74
C11orf88Q6PI97 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.21□□□□□ -1.74
C11orf88Q6PI97 Z99714.1-201ENST00000450463 807 ntBASIC4.21□□□□□ -1.74
C11orf88Q6PI97 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.21□□□□□ -1.74
C11orf88Q6PI97 AC104634.1-201ENST00000452720 462 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms