Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 OTUD4P1-201ENST00000237841 3067 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AL354976.1-201ENST00000613843 387 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AP003355.3-201ENST00000623465 114 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 NPM1P38-201ENST00000403835 865 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 SNORA3C-201ENST00000408792 125 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 USP9YP2-201ENST00000504503 1000 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 USP9YP1-201ENST00000513521 1002 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 RNU2-27P-201ENST00000516185 142 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC091544.4-201ENST00000555268 342 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 RPS29P4-201ENST00000414733 161 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 SEPT14P1-201ENST00000458703 648 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 RN7SL504P-201ENST00000494496 287 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC090337.1-201ENST00000579651 2074 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC083843.3-201ENST00000623679 2186 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 RNU6-316P-201ENST00000391027 107 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 RN7SKP53-201ENST00000411337 315 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 ATP5C1P1-201ENST00000441945 895 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AL133247.2-201ENST00000603236 482 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 ARF4P3-201ENST00000397387 509 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 SDCBPP2-201ENST00000424643 885 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 RN7SL585P-201ENST00000470538 280 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 TMED11P-201ENST00000479478 690 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 AL451007.1-201ENST00000595491 289 ntBASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13DQ5THJ4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC092435.4-201ENST00000623012 4159 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC024341.1-201ENST00000526444 1552 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 RNA5SP52-201ENST00000362448 134 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AL603766.1-201ENST00000407763 664 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 RN7SKP97-201ENST00000410966 333 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 ARL4AP3-201ENST00000441452 574 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC007336.1-201ENST00000576365 3828 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC243654.2-201ENST00000612843 443 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AP000553.6-201ENST00000641242 118 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 OR5AC4P-202ENST00000642086 985 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC118273.1-201ENST00000525324 3006 ntBASIC2.41□□□□□ -2.02
VPS13DQ5THJ4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms