Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GABPAQ06546 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.68□□□□□ -1.66
GABPAQ06546 MIR4429-201ENST00000580105 73 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.68□□□□□ -1.66
GABPAQ06546 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.68□□□□□ -1.66
GABPAQ06546 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.68□□□□□ -1.66
GABPAQ06546 AC112200.1-201ENST00000625015 234 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 AC012442.3-202ENST00000636742 206 ntBASIC4.68□□□□□ -1.66
GABPAQ06546 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.68□□□□□ -1.66
GABPAQ06546 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GABPAQ06546 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
GABPAQ06546 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
GABPAQ06546 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
GABPAQ06546 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
GABPAQ06546 MTND4P21-201ENST00000453886 1357 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GABPAQ06546 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
GABPAQ06546 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
GABPAQ06546 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.67□□□□□ -1.66
GABPAQ06546 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GABPAQ06546 OR51A6P-201ENST00000418680 1004 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 NDUFA5P10-201ENST00000432147 357 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.67□□□□□ -1.66
GABPAQ06546 AL450263.2-201ENST00000439400 589 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.67□□□□□ -1.66
GABPAQ06546 NOTCH2P1-201ENST00000443481 624 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.67□□□□□ -1.66
GABPAQ06546 PTMAP3-201ENST00000447474 330 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 AL133244.1-201ENST00000456007 258 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 RPS26P28-201ENST00000470806 348 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 ARL4AP1-201ENST00000503220 705 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 HAUS1P1-201ENST00000505275 832 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 COL6A4P2-205ENST00000509855 506 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 MTND2P31-201ENST00000512602 616 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 SCARNA14-201ENST00000516903 136 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.67□□□□□ -1.66
GABPAQ06546 AP003168.1-201ENST00000530091 307 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 CYP4A43P-201ENST00000568156 121 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.67□□□□□ -1.66
GABPAQ06546 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.67□□□□□ -1.66
GABPAQ06546 CR589904.2-201ENST00000612533 440 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 AL356490.1-201ENST00000623079 479 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 RPL23AP61-201ENST00000623642 466 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 AC073530.2-201ENST00000623987 261 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.67□□□□□ -1.66
GABPAQ06546 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.67□□□□□ -1.66
GABPAQ06546 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.67□□□□□ -1.66
GABPAQ06546 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
GABPAQ06546 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
GABPAQ06546 AP001273.1-201ENST00000624493 3152 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 AL161912.2-201ENST00000565707 3007 ntBASIC4.67□□□□□ -1.66
GABPAQ06546 MAPK10-372ENST00000641954 3413 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.66□□□□□ -1.66
GABPAQ06546 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
GABPAQ06546 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
GABPAQ06546 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 AC007342.7-201ENST00000624610 2337 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.66□□□□□ -1.66
GABPAQ06546 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.66□□□□□ -1.66
GABPAQ06546 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
GABPAQ06546 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 U1.1-201ENST00000384101 164 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 RNU6-31P-201ENST00000384388 108 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 MIR30B-201ENST00000384850 88 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 Z97055.1-201ENST00000419730 712 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 CACYBPP1-201ENST00000438592 684 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.66□□□□□ -1.66
GABPAQ06546 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.66□□□□□ -1.66
GABPAQ06546 EIF2S2P5-201ENST00000457635 968 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AP000942.1-201ENST00000463969 747 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 RPS3AP6-201ENST00000484430 795 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 OR9N1P-202ENST00000494289 481 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 RN7SL323P-201ENST00000494712 295 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AL139099.1-201ENST00000497398 403 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 CDH12P2-201ENST00000504393 298 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.66□□□□□ -1.66
GABPAQ06546 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.66□□□□□ -1.66
GABPAQ06546 CYCSP30-201ENST00000546447 172 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AC015726.1-201ENST00000602353 681 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AC040174.2-201ENST00000602701 465 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AC104662.1-201ENST00000604448 511 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AC135803.1-201ENST00000608748 565 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AL121772.2-201ENST00000614331 297 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AL162574.2-201ENST00000614618 657 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AC245389.2-201ENST00000616023 576 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AC242843.1-201ENST00000618702 573 ntBASIC4.66□□□□□ -1.66
GABPAQ06546 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
GABPAQ06546 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GABPAQ06546 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
GABPAQ06546 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms