Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 MTND2P25-201ENST00000449028 610 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 BUD31P2-201ENST00000449374 300 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 RPS11P1-201ENST00000451072 473 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 FABP3P2-201ENST00000453169 399 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 RN7SL860P-201ENST00000473738 223 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 SYT14P1-201ENST00000481459 721 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 IGBP1P5-201ENST00000507524 1000 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC109458.1-201ENST00000508858 316 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC025884.1-201ENST00000556034 378 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC067805.1-201ENST00000559344 470 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC092868.3-201ENST00000560515 784 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC136624.4-201ENST00000573044 370 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC073111.2-201ENST00000605657 1075 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 BX322635.1-201ENST00000605804 496 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AP003392.5-201ENST00000607857 415 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC010608.2-201ENST00000624830 470 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 AC092159.4-201ENST00000624944 550 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGCS1Q01581 IQCB2P-201ENST00000401788 1633 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGCS1Q01581 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGCS1Q01581 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
HMGCS1Q01581 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HMGCS1Q01581 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 AC093311.1-201ENST00000506586 2021 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 SNORA70C-201ENST00000384538 135 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 MIR7-1-201ENST00000384871 110 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS1Q01581 AC073464.3-201ENST00000422564 712 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 NIPA2P1-201ENST00000426223 976 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 STRADBP1-201ENST00000478954 1281 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS1Q01581 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS1Q01581 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 MRPS35P3-201ENST00000603189 709 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 AC103858.2-201ENST00000621471 543 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 AL356121.2-201ENST00000624715 780 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 IPO8P1-201ENST00000455509 3109 ntBASIC3.82□□□□□ -1.8
HMGCS1Q01581 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGCS1Q01581 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGCS1Q01581 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS1Q01581 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 RNA5SP399-201ENST00000364003 117 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS1Q01581 MIR92A2-201ENST00000385299 75 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 RPS26P8-201ENST00000393490 348 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 RPL7AP73-201ENST00000413490 353 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC108032.1-201ENST00000416706 207 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS1Q01581 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 NPM1P34-201ENST00000428821 893 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC091390.1-201ENST00000433904 331 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AL356276.2-201ENST00000435919 558 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 TBCAP1-201ENST00000436520 327 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 AL356535.1-201ENST00000440335 398 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 MORF4L1P4-201ENST00000450245 976 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 EIF2S2P4-201ENST00000461070 984 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 RPL7P19-201ENST00000469948 618 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms