Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GTF2BQ00403 AC106901.1-201ENST00000425086 698 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AL158073.1-201ENST00000426848 1104 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AC092809.1-201ENST00000441469 474 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 U8.18-201ENST00000459285 133 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.12□□□□□ -1.75
GTF2BQ00403 AC107015.1-201ENST00000466902 747 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AC004069.2-201ENST00000505438 1114 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.12□□□□□ -1.75
GTF2BQ00403 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.12□□□□□ -1.75
GTF2BQ00403 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.12□□□□□ -1.75
GTF2BQ00403 AC007991.1-201ENST00000522680 631 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.12□□□□□ -1.75
GTF2BQ00403 HMGB3P26-201ENST00000560051 582 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AC006960.3-201ENST00000561845 705 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AL360157.1-201ENST00000565962 87 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.12□□□□□ -1.75
GTF2BQ00403 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.12□□□□□ -1.75
GTF2BQ00403 AC012557.1-201ENST00000607115 611 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AC016252.1-201ENST00000609721 474 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 AP003072.5-201ENST00000623872 773 ntBASIC4.12□□□□□ -1.75
GTF2BQ00403 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.12□□□□□ -1.75
GTF2BQ00403 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
GTF2BQ00403 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.12□□□□□ -1.75
GTF2BQ00403 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.12□□□□□ -1.75
GTF2BQ00403 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GTF2BQ00403 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GTF2BQ00403 MAPK10-372ENST00000641954 3413 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.11□□□□□ -1.75
GTF2BQ00403 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GTF2BQ00403 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GTF2BQ00403 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.11□□□□□ -1.75
GTF2BQ00403 RNU6-1263P-201ENST00000384601 106 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
GTF2BQ00403 AC010740.1-201ENST00000417035 684 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 MTND2P15-201ENST00000418575 892 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 RPL36AP36-201ENST00000418616 301 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 AL590609.2-201ENST00000421430 368 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 AC092017.2-201ENST00000427600 362 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.11□□□□□ -1.75
GTF2BQ00403 RRM2P4-201ENST00000441721 562 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 MTND2P25-201ENST00000449028 610 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.11□□□□□ -1.75
GTF2BQ00403 AC007688.1-201ENST00000475592 759 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.11□□□□□ -1.75
GTF2BQ00403 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.11□□□□□ -1.75
GTF2BQ00403 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.11□□□□□ -1.75
GTF2BQ00403 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.11□□□□□ -1.75
GTF2BQ00403 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.11□□□□□ -1.75
GTF2BQ00403 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GTF2BQ00403 DUX4L52-201ENST00000549363 777 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
GTF2BQ00403 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.11□□□□□ -1.75
GTF2BQ00403 AC091905.1-201ENST00000624400 311 ntBASIC4.11□□□□□ -1.75
GTF2BQ00403 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
GTF2BQ00403 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
GTF2BQ00403 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GTF2BQ00403 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
GTF2BQ00403 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
GTF2BQ00403 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.1□□□□□ -1.75
GTF2BQ00403 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GTF2BQ00403 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
GTF2BQ00403 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
GTF2BQ00403 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
GTF2BQ00403 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.1□□□□□ -1.75
GTF2BQ00403 RNA5SP502-201ENST00000362694 119 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
GTF2BQ00403 RNU6-729P-201ENST00000384399 107 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 HMGN2P8-201ENST00000391458 268 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
GTF2BQ00403 SNORA57.3-201ENST00000411095 141 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 CYCSP19-201ENST00000411715 316 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.1□□□□□ -1.75
GTF2BQ00403 AC244033.1-201ENST00000426826 870 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.1□□□□□ -1.75
GTF2BQ00403 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.1□□□□□ -1.75
GTF2BQ00403 AF228730.2-201ENST00000438784 848 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 NOTCH2P1-201ENST00000443481 624 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 AL162388.1-201ENST00000450912 352 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.1□□□□□ -1.75
GTF2BQ00403 NDUFB4P12-201ENST00000513465 390 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 RN7SKP209-201ENST00000516888 304 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.1□□□□□ -1.75
GTF2BQ00403 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.1□□□□□ -1.75
GTF2BQ00403 AL049634.3-201ENST00000604968 457 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 BRDTP1-201ENST00000605735 677 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.1□□□□□ -1.75
GTF2BQ00403 AC096586.2-201ENST00000610260 441 ntBASIC4.1□□□□□ -1.75
GTF2BQ00403 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.1□□□□□ -1.75
GTF2BQ00403 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.1□□□□□ -1.75
GTF2BQ00403 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
GTF2BQ00403 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GTF2BQ00403 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.09□□□□□ -1.75
GTF2BQ00403 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.09□□□□□ -1.75
GTF2BQ00403 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GTF2BQ00403 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.09□□□□□ -1.75
GTF2BQ00403 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GTF2BQ00403 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
GTF2BQ00403 RNU6-984P-201ENST00000363236 109 ntBASIC4.09□□□□□ -1.75
GTF2BQ00403 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms