Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.95□□□□□ -1.62
NKX6-1P78426 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.95□□□□□ -1.62
NKX6-1P78426 KARSP3-201ENST00000571212 1504 ntBASIC4.95□□□□□ -1.62
NKX6-1P78426 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NKX6-1P78426 AC114774.1-201ENST00000507410 1770 ntBASIC4.95□□□□□ -1.62
NKX6-1P78426 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX6-1P78426 MTND5P28-201ENST00000438005 1594 ntBASIC4.95□□□□□ -1.62
NKX6-1P78426 STX3-208ENST00000641815 3236 ntBASIC4.95□□□□□ -1.62
NKX6-1P78426 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NKX6-1P78426 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 AP004607.3-201ENST00000530354 3915 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX6-1P78426 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 AC005332.5-201ENST00000591222 2919 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
NKX6-1P78426 CR383658.2-201ENST00000547576 1525 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 RPL37P18-201ENST00000411602 243 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AL139128.1-201ENST00000413921 941 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX6-1P78426 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 AL590609.2-201ENST00000421430 368 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX6-1P78426 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 AL139148.1-201ENST00000427122 680 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX6-1P78426 AL589823.1-201ENST00000429577 183 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX6-1P78426 RPL12P46-201ENST00000436610 195 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX6-1P78426 OR7E116P-201ENST00000448529 957 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 TRGVB-201ENST00000453257 471 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 RNU6-956P-201ENST00000458868 103 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 RN7SL172P-201ENST00000460535 303 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AC004453.1-201ENST00000487895 408 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AC005726.1-201ENST00000494679 427 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AC090638.1-201ENST00000498296 909 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX6-1P78426 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX6-1P78426 NDUFB5P1-201ENST00000508134 564 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NKX6-1P78426 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX6-1P78426 MRPS16P1-201ENST00000523462 412 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AC087276.1-201ENST00000529659 480 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
NKX6-1P78426 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX6-1P78426 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX6-1P78426 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 MIR5186-201ENST00000577504 120 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX6-1P78426 MIR4637-201ENST00000582405 84 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX6-1P78426 AL391497.1-201ENST00000608671 547 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AL121612.2-201ENST00000612261 482 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AL356596.1-201ENST00000624230 379 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 HSPA8P14-201ENST00000552265 1805 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 AC114786.1-201ENST00000512892 1415 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 AC007529.1-201ENST00000418574 2178 ntBASIC4.94□□□□□ -1.62
NKX6-1P78426 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX6-1P78426 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX6-1P78426 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AL138820.1-201ENST00000617901 5305 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 Z95331.1-201ENST00000623075 23112 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NKX6-1P78426 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX6-1P78426 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NKX6-1P78426 RNA5SP319-201ENST00000362768 119 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 RNU4-21P-201ENST00000362802 126 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 RNU6-501P-201ENST00000364072 100 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 Y_RNA.553-201ENST00000384670 102 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms