Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.58□□□□□ -1.52
YBX1P67809 AC114981.1-201ENST00000503897 678 ntBASIC5.58□□□□□ -1.52
YBX1P67809 HMGN1P13-201ENST00000505795 138 ntBASIC5.58□□□□□ -1.52
YBX1P67809 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.58□□□□□ -1.52
YBX1P67809 MTCO1P30-201ENST00000515244 580 ntBASIC5.58□□□□□ -1.52
YBX1P67809 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.58□□□□□ -1.52
YBX1P67809 FAM92A1P1-201ENST00000528023 890 ntBASIC5.58□□□□□ -1.52
YBX1P67809 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.58□□□□□ -1.52
YBX1P67809 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.58□□□□□ -1.52
YBX1P67809 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.58□□□□□ -1.52
YBX1P67809 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.58□□□□□ -1.52
YBX1P67809 AC096996.1-201ENST00000563813 325 ntBASIC5.58□□□□□ -1.52
YBX1P67809 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.58□□□□□ -1.52
YBX1P67809 MIR5697-201ENST00000578045 78 ntBASIC5.58□□□□□ -1.52
YBX1P67809 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.58□□□□□ -1.52
YBX1P67809 AC010487.1-201ENST00000594408 1172 ntBASIC5.58□□□□□ -1.52
YBX1P67809 COX6CP7-201ENST00000597056 208 ntBASIC5.58□□□□□ -1.52
YBX1P67809 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.58□□□□□ -1.52
YBX1P67809 PRELID3BP8-201ENST00000604148 295 ntBASIC5.58□□□□□ -1.52
YBX1P67809 AC013244.1-201ENST00000604279 193 ntBASIC5.58□□□□□ -1.52
YBX1P67809 AL121655.1-201ENST00000605811 308 ntBASIC5.58□□□□□ -1.52
YBX1P67809 Y_RNA.812-201ENST00000610788 101 ntBASIC5.58□□□□□ -1.52
YBX1P67809 Y_RNA.784-201ENST00000613803 101 ntBASIC5.58□□□□□ -1.52
YBX1P67809 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
YBX1P67809 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.58□□□□□ -1.52
YBX1P67809 Y_RNA.787-201ENST00000616522 101 ntBASIC5.58□□□□□ -1.52
YBX1P67809 Y_RNA.780-201ENST00000617336 101 ntBASIC5.58□□□□□ -1.52
YBX1P67809 Y_RNA.801-201ENST00000619005 101 ntBASIC5.58□□□□□ -1.52
YBX1P67809 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.58□□□□□ -1.52
YBX1P67809 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
YBX1P67809 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
YBX1P67809 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.58□□□□□ -1.52
YBX1P67809 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
YBX1P67809 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
YBX1P67809 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
YBX1P67809 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
YBX1P67809 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
YBX1P67809 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.58□□□□□ -1.52
YBX1P67809 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.58□□□□□ -1.52
YBX1P67809 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
YBX1P67809 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
YBX1P67809 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.58□□□□□ -1.52
YBX1P67809 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
YBX1P67809 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
YBX1P67809 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
YBX1P67809 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.57□□□□□ -1.52
YBX1P67809 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
YBX1P67809 HSPA8P17-201ENST00000427029 1382 ntBASIC5.57□□□□□ -1.52
YBX1P67809 ZNF37BP-203ENST00000452306 1352 ntBASIC5.57□□□□□ -1.52
YBX1P67809 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
YBX1P67809 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
YBX1P67809 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.57□□□□□ -1.52
YBX1P67809 AL159987.1-201ENST00000347911 293 ntBASIC5.57□□□□□ -1.52
YBX1P67809 MIR323A-201ENST00000362199 86 ntBASIC5.57□□□□□ -1.52
YBX1P67809 RNA5SP510-201ENST00000364697 99 ntBASIC5.57□□□□□ -1.52
YBX1P67809 RNU4-7P-201ENST00000364758 141 ntBASIC5.57□□□□□ -1.52
YBX1P67809 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.57□□□□□ -1.52
YBX1P67809 Y_RNA.409-201ENST00000383990 98 ntBASIC5.57□□□□□ -1.52
YBX1P67809 RNU6-98P-201ENST00000384173 107 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AL589647.1-201ENST00000402485 466 ntBASIC5.57□□□□□ -1.52
YBX1P67809 RN7SKP279-201ENST00000411383 298 ntBASIC5.57□□□□□ -1.52
YBX1P67809 RPS3AP3-201ENST00000411933 242 ntBASIC5.57□□□□□ -1.52
YBX1P67809 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
YBX1P67809 AC007390.1-201ENST00000415722 356 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.57□□□□□ -1.52
YBX1P67809 BX295541.1-201ENST00000417774 250 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AC079355.1-201ENST00000421770 223 ntBASIC5.57□□□□□ -1.52
YBX1P67809 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
YBX1P67809 HSPD1P12-201ENST00000429127 1069 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.57□□□□□ -1.52
YBX1P67809 AL513175.1-201ENST00000431492 780 ntBASIC5.57□□□□□ -1.52
YBX1P67809 HMGB3P24-201ENST00000433260 622 ntBASIC5.57□□□□□ -1.52
YBX1P67809 RPL21P110-201ENST00000433345 446 ntBASIC5.57□□□□□ -1.52
YBX1P67809 BMS1P19-201ENST00000433925 393 ntBASIC5.57□□□□□ -1.52
YBX1P67809 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
YBX1P67809 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
YBX1P67809 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.57□□□□□ -1.52
YBX1P67809 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.57□□□□□ -1.52
YBX1P67809 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 NPM1P39-201ENST00000449818 867 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.57□□□□□ -1.52
YBX1P67809 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 TRBV8-2-201ENST00000475637 270 ntBASIC5.57□□□□□ -1.52
YBX1P67809 RPL15P21-201ENST00000495592 567 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AC021678.1-201ENST00000505195 936 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.57□□□□□ -1.52
YBX1P67809 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.57□□□□□ -1.52
YBX1P67809 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.57□□□□□ -1.52
YBX1P67809 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.57□□□□□ -1.52
YBX1P67809 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.57□□□□□ -1.52
YBX1P67809 AC022832.1-201ENST00000530718 645 ntBASIC5.57□□□□□ -1.52
YBX1P67809 ARL2BPP2-201ENST00000550907 489 ntBASIC5.57□□□□□ -1.52
YBX1P67809 CBX3P5-201ENST00000552017 521 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AL512360.1-201ENST00000555346 234 ntBASIC5.57□□□□□ -1.52
YBX1P67809 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.57□□□□□ -1.52
YBX1P67809 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms