Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC099489.2-201ENST00000574976 260 ntBASIC3.45□□□□□ -1.86
UBA52P62987 AC053481.4-201ENST00000583164 216 ntBASIC3.45□□□□□ -1.86
UBA52P62987 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.45□□□□□ -1.86
UBA52P62987 FAM27D1-201ENST00000612308 341 ntBASIC3.45□□□□□ -1.86
UBA52P62987 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
UBA52P62987 RLIMP2-201ENST00000427891 1563 ntBASIC3.45□□□□□ -1.86
UBA52P62987 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.45□□□□□ -1.86
UBA52P62987 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.45□□□□□ -1.86
UBA52P62987 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
UBA52P62987 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBA52P62987 AC092162.3-201ENST00000624511 1624 ntBASIC3.44□□□□□ -1.86
UBA52P62987 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 RNA5SP130-201ENST00000364431 114 ntBASIC3.44□□□□□ -1.86
UBA52P62987 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
UBA52P62987 RN7SKP159-201ENST00000410657 292 ntBASIC3.44□□□□□ -1.86
UBA52P62987 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.44□□□□□ -1.86
UBA52P62987 HMGB3P5-201ENST00000428894 612 ntBASIC3.44□□□□□ -1.86
UBA52P62987 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.44□□□□□ -1.86
UBA52P62987 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.44□□□□□ -1.86
UBA52P62987 VN1R105P-201ENST00000486595 910 ntBASIC3.44□□□□□ -1.86
UBA52P62987 BNIP3P41-201ENST00000503774 571 ntBASIC3.44□□□□□ -1.86
UBA52P62987 AC004069.2-201ENST00000505438 1114 ntBASIC3.44□□□□□ -1.86
UBA52P62987 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.44□□□□□ -1.86
UBA52P62987 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.44□□□□□ -1.86
UBA52P62987 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
UBA52P62987 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
UBA52P62987 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.44□□□□□ -1.86
UBA52P62987 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.44□□□□□ -1.86
UBA52P62987 AC006064.5-201ENST00000541782 248 ntBASIC3.44□□□□□ -1.86
UBA52P62987 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.44□□□□□ -1.86
UBA52P62987 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.44□□□□□ -1.86
UBA52P62987 AC053481.3-201ENST00000577881 843 ntBASIC3.44□□□□□ -1.86
UBA52P62987 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.44□□□□□ -1.86
UBA52P62987 AL021997.2-201ENST00000615674 271 ntBASIC3.44□□□□□ -1.86
UBA52P62987 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.44□□□□□ -1.86
UBA52P62987 CDRT1-208ENST00000630868 794 ntBASIC3.44□□□□□ -1.86
UBA52P62987 FP325313.1-201ENST00000638228 703 ntBASIC3.44□□□□□ -1.86
UBA52P62987 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
UBA52P62987 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
UBA52P62987 MTND5P12-201ENST00000502851 1449 ntBASIC3.44□□□□□ -1.86
UBA52P62987 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UBA52P62987 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.44□□□□□ -1.86
UBA52P62987 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 CR381670.1-201ENST00000624291 1693 ntBASIC3.43□□□□□ -1.86
UBA52P62987 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
UBA52P62987 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
UBA52P62987 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 ENSAP1-201ENST00000392855 326 ntBASIC3.43□□□□□ -1.86
UBA52P62987 ATP5F1P4-201ENST00000397288 746 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AL583835.1-201ENST00000399570 407 ntBASIC3.43□□□□□ -1.86
UBA52P62987 NCSTNP1-201ENST00000406229 144 ntBASIC3.43□□□□□ -1.86
UBA52P62987 RN7SKP235-201ENST00000410662 305 ntBASIC3.43□□□□□ -1.86
UBA52P62987 RN7SKP182-201ENST00000410772 298 ntBASIC3.43□□□□□ -1.86
UBA52P62987 OR8G2P-201ENST00000412796 908 ntBASIC3.43□□□□□ -1.86
UBA52P62987 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.43□□□□□ -1.86
UBA52P62987 EIF1P3-201ENST00000423841 334 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AL157831.1-201ENST00000426134 473 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.43□□□□□ -1.86
UBA52P62987 RRM2P4-201ENST00000441721 562 ntBASIC3.43□□□□□ -1.86
UBA52P62987 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.43□□□□□ -1.86
UBA52P62987 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.43□□□□□ -1.86
UBA52P62987 S100A11P1-201ENST00000477525 312 ntBASIC3.43□□□□□ -1.86
UBA52P62987 TPT1P3-201ENST00000492841 512 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.43□□□□□ -1.86
UBA52P62987 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.43□□□□□ -1.86
UBA52P62987 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.43□□□□□ -1.86
UBA52P62987 NPM1P41-201ENST00000512920 831 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AC099522.1-202ENST00000514718 367 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.43□□□□□ -1.86
UBA52P62987 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
UBA52P62987 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.43□□□□□ -1.86
UBA52P62987 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 AL354984.3-201ENST00000604803 325 ntBASIC3.43□□□□□ -1.86
UBA52P62987 OR6R2P-201ENST00000609216 300 ntBASIC3.43□□□□□ -1.86
UBA52P62987 RNVU1-4-201ENST00000612985 164 ntBASIC3.43□□□□□ -1.86
UBA52P62987 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AC007546.1-201ENST00000619452 559 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AL445363.3-201ENST00000623080 671 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AP006248.2-201ENST00000623309 592 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AC010608.2-201ENST00000624830 470 ntBASIC3.43□□□□□ -1.86
UBA52P62987 AP005264.7-201ENST00000625003 745 ntBASIC3.43□□□□□ -1.86
UBA52P62987 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms