Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU5E-5P-201ENST00000365379 116 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CLRN1P58418 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.92□□□□□ -1.62
CLRN1P58418 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 HMGN1P14-201ENST00000412459 517 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 AL133173.1-201ENST00000423458 397 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AL662874.1-201ENST00000426065 230 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC092427.1-201ENST00000439177 601 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 DNAJC19P4-201ENST00000440115 345 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AL022238.1-201ENST00000442557 355 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 VN1R10P-201ENST00000447106 875 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 VDAC2P4-201ENST00000452925 711 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC027673.1-201ENST00000456245 405 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 SNORD42A-201ENST00000459584 64 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC091564.1-201ENST00000464563 479 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 KLF3P2-201ENST00000465138 268 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AL358832.1-201ENST00000497800 389 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.92□□□□□ -1.62
CLRN1P58418 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.92□□□□□ -1.62
CLRN1P58418 SNORD46.2-201ENST00000516021 102 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 RNU6-150P-201ENST00000516237 95 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 RN7SKP244-201ENST00000516513 307 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 RNU6-506P-201ENST00000516553 94 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 RN7SKP99-201ENST00000517028 307 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC112191.2-201ENST00000522428 333 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.92□□□□□ -1.62
CLRN1P58418 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.92□□□□□ -1.62
CLRN1P58418 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.92□□□□□ -1.62
CLRN1P58418 OR6C73P-201ENST00000546432 358 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 MTCO3P24-201ENST00000572729 782 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.92□□□□□ -1.62
CLRN1P58418 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.92□□□□□ -1.62
CLRN1P58418 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 AC119501.1-201ENST00000603646 475 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC067959.1-201ENST00000604334 379 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC243773.3-201ENST00000613270 256 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.92□□□□□ -1.62
CLRN1P58418 OR5H6-203ENST00000642105 978 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CLRN1P58418 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.91□□□□□ -1.62
CLRN1P58418 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 LINC00561-201ENST00000565815 2738 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC004520.1-201ENST00000608362 1413 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 AC140134.1-201ENST00000511830 3544 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CLRN1P58418 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
CLRN1P58418 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CLRN1P58418 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 RNA5SP46-201ENST00000362370 120 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 Y_RNA.97-201ENST00000363094 102 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 RN7SKP6-201ENST00000364795 319 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 RNA5SP284-201ENST00000384547 118 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 RNU6-297P-201ENST00000384636 107 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 SNORA40.3-201ENST00000390964 122 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 Y_RNA.582-201ENST00000391023 95 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 SNRPEP2-201ENST00000397592 279 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 AL390316.1-201ENST00000406279 553 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.91□□□□□ -1.62
CLRN1P58418 RPL30P16-201ENST00000419341 429 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 Z97055.1-201ENST00000419730 712 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.91□□□□□ -1.62
CLRN1P58418 AL138899.2-201ENST00000439139 499 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 AZGP1P2-201ENST00000454506 345 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 MTND6P6-201ENST00000478031 263 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.91□□□□□ -1.62
CLRN1P58418 KLRA1P-201ENST00000503499 986 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.91□□□□□ -1.62
CLRN1P58418 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC093815.1-201ENST00000508637 280 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 AF131216.2-201ENST00000512316 564 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.91□□□□□ -1.62
CLRN1P58418 MTND5P4-201ENST00000514978 288 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms