Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 Y_RNA.719-201ENST00000517156 106 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 RNU6-709P-201ENST00000517257 104 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN20P56880 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.34□□□□□ -1.71
CLDN20P56880 AC023050.2-201ENST00000544968 387 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AC133555.2-201ENST00000550213 292 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN20P56880 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN20P56880 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN20P56880 AC079075.1-201ENST00000559543 878 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.34□□□□□ -1.71
CLDN20P56880 AC009097.3-201ENST00000563557 1018 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN20P56880 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN20P56880 MTND3P13-201ENST00000574391 343 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 MIR5708-201ENST00000579723 85 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AC015688.2-201ENST00000584523 262 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AC115085.1-201ENST00000588924 229 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 AC245036.5-201ENST00000596330 847 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 GAS5-AS1-201ENST00000602767 694 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AL512782.1-201ENST00000603093 364 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 PSMA6P4-201ENST00000603247 718 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.34□□□□□ -1.71
CLDN20P56880 AL391358.1-201ENST00000605342 190 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AL121932.1-201ENST00000605542 214 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 Z99289.3-201ENST00000605586 594 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CLDN20P56880 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN20P56880 SNX18P1Y-201ENST00000616231 511 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AP002782.1-201ENST00000623107 614 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AC116563.2-201ENST00000624751 535 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AC055839.1-201ENST00000634467 498 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.34□□□□□ -1.71
CLDN20P56880 MFSD8-245ENST00000641743 948 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 SGO1P1-201ENST00000603525 1447 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLDN20P56880 ASNSP1-204ENST00000641977 1664 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 AC119744.1-201ENST00000454746 1715 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CLDN20P56880 SDAD1P1-202ENST00000524156 2051 ntBASIC4.34□□□□□ -1.71
CLDN20P56880 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN20P56880 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN20P56880 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN20P56880 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN20P56880 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN20P56880 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN20P56880 DDX18P5-201ENST00000534547 1306 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN20P56880 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN20P56880 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CLDN20P56880 MIR92A2-201ENST00000385299 75 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN20P56880 RN7SKP100-201ENST00000411258 284 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 RNU6-575P-201ENST00000411326 105 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 RSU1P3-201ENST00000412878 835 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC234782.4-201ENST00000417646 1048 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN20P56880 USP9YP9-201ENST00000429406 715 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 RPL12P28-201ENST00000430852 489 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 CETN4P-201ENST00000432407 469 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN20P56880 RPS17P8-201ENST00000434525 335 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC092013.1-201ENST00000438795 332 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 ELOCP10-201ENST00000440624 327 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN20P56880 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN20P56880 MRPL35P4-201ENST00000453682 566 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN20P56880 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC096992.1-201ENST00000459808 709 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 GAPDHP39-201ENST00000481866 979 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC092593.2-201ENST00000513866 913 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN20P56880 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 OR4U1P-201ENST00000554958 912 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC023813.2-201ENST00000564321 469 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 BPTFP1-201ENST00000579209 492 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC091042.1-201ENST00000579213 173 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN20P56880 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN20P56880 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC068790.7-201ENST00000602347 528 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 MTND3P19-201ENST00000603825 345 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 ELOCP34-201ENST00000604436 327 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC025588.2-201ENST00000604851 466 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AL392112.1-201ENST00000605115 829 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC107952.2-201ENST00000606048 486 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC021755.4-201ENST00000616620 456 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms