Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC009704.2-201ENST00000618739 483 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AL023881.1-201ENST00000621088 301 ntBASIC4.22□□□□□ -1.73
CDH11P55287 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.22□□□□□ -1.73
CDH11P55287 CR381572.2-201ENST00000624852 397 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.22□□□□□ -1.73
CDH11P55287 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 MTCO1P6-201ENST00000481192 1384 ntBASIC4.22□□□□□ -1.73
CDH11P55287 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CDH11P55287 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 AC017104.4-201ENST00000636283 1592 ntBASIC4.22□□□□□ -1.73
CDH11P55287 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CDH11P55287 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH11P55287 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDH11P55287 AL031119.1-201ENST00000404707 1879 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC010329.2-201ENST00000595195 2737 ntBASIC4.22□□□□□ -1.73
CDH11P55287 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CDH11P55287 AC104446.1-201ENST00000613728 1321 ntBASIC4.21□□□□□ -1.73
CDH11P55287 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDH11P55287 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDH11P55287 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH11P55287 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH11P55287 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH11P55287 RNU1-94P-201ENST00000362627 173 ntBASIC4.21□□□□□ -1.74
CDH11P55287 RNU6-1339P-201ENST00000363574 91 ntBASIC4.21□□□□□ -1.74
CDH11P55287 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH11P55287 RNU6-317P-201ENST00000384031 107 ntBASIC4.21□□□□□ -1.74
CDH11P55287 RNU6-398P-201ENST00000384143 109 ntBASIC4.21□□□□□ -1.74
CDH11P55287 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH11P55287 MIR1303-201ENST00000408625 86 ntBASIC4.21□□□□□ -1.74
CDH11P55287 RNU4-22P-201ENST00000411058 166 ntBASIC4.21□□□□□ -1.74
CDH11P55287 RNU2-6P-201ENST00000411404 190 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AC016397.1-201ENST00000412463 242 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AC119751.6-201ENST00000416712 186 ntBASIC4.21□□□□□ -1.74
CDH11P55287 BX510359.2-201ENST00000417920 305 ntBASIC4.21□□□□□ -1.74
CDH11P55287 NIPA2P1-201ENST00000426223 976 ntBASIC4.21□□□□□ -1.74
CDH11P55287 RPS24P8-201ENST00000431490 402 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AL035246.1-201ENST00000433554 1255 ntBASIC4.21□□□□□ -1.74
CDH11P55287 USP9YP24-201ENST00000434374 697 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH11P55287 CBX1P4-201ENST00000439415 457 ntBASIC4.21□□□□□ -1.74
CDH11P55287 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH11P55287 AL592437.1-201ENST00000443781 492 ntBASIC4.21□□□□□ -1.74
CDH11P55287 ELOCP13-201ENST00000443934 329 ntBASIC4.21□□□□□ -1.74
CDH11P55287 USP9YP17-201ENST00000444617 696 ntBASIC4.21□□□□□ -1.74
CDH11P55287 MTCYBP42-201ENST00000444653 1130 ntBASIC4.21□□□□□ -1.74
CDH11P55287 MTND1P33-201ENST00000446251 917 ntBASIC4.21□□□□□ -1.74
CDH11P55287 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH11P55287 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH11P55287 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH11P55287 RPL7AP28-201ENST00000464513 571 ntBASIC4.21□□□□□ -1.74
CDH11P55287 RPL23AP12-201ENST00000467573 473 ntBASIC4.21□□□□□ -1.74
CDH11P55287 MTCO3P35-201ENST00000485582 781 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDH11P55287 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH11P55287 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH11P55287 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH11P55287 RN7SKP276-201ENST00000516242 268 ntBASIC4.21□□□□□ -1.74
CDH11P55287 NPM1P6-201ENST00000521088 871 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH11P55287 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH11P55287 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH11P55287 DEFB130C-202ENST00000530001 230 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AC124293.1-201ENST00000530034 493 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AC133555.2-201ENST00000550213 292 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH11P55287 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH11P55287 MIR5699-201ENST00000578903 90 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AC091178.1-203ENST00000584586 279 ntBASIC4.21□□□□□ -1.74
CDH11P55287 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
CDH11P55287 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH11P55287 EIF1P6-201ENST00000600054 334 ntBASIC4.21□□□□□ -1.74
CDH11P55287 RPL7P50-201ENST00000600588 727 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH11P55287 AL035411.2-201ENST00000604022 421 ntBASIC4.21□□□□□ -1.74
CDH11P55287 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH11P55287 AC007497.1-201ENST00000610421 561 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AL138478.1-201ENST00000612252 832 ntBASIC4.21□□□□□ -1.74
CDH11P55287 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH11P55287 AC006386.1-201ENST00000619436 415 ntBASIC4.21□□□□□ -1.74
CDH11P55287 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.21□□□□□ -1.74
CDH11P55287 AP000346.3-201ENST00000622821 210 ntBASIC4.21□□□□□ -1.74
CDH11P55287 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH11P55287 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH11P55287 AC111188.2-201ENST00000529697 1387 ntBASIC4.21□□□□□ -1.74
CDH11P55287 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH11P55287 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH11P55287 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH11P55287 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH11P55287 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH11P55287 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH11P55287 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH11P55287 AL355578.1-201ENST00000607405 1328 ntBASIC4.21□□□□□ -1.74
CDH11P55287 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CDH11P55287 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms