Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.6□□□□□ -1.67
VCPP55072 DHFRP3-201ENST00000455595 559 ntBASIC4.6□□□□□ -1.67
VCPP55072 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.6□□□□□ -1.67
VCPP55072 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.6□□□□□ -1.67
VCPP55072 OR52A4P-202ENST00000481634 799 ntBASIC4.6□□□□□ -1.67
VCPP55072 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.6□□□□□ -1.67
VCPP55072 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VCPP55072 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
VCPP55072 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VCPP55072 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.6□□□□□ -1.67
VCPP55072 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.6□□□□□ -1.67
VCPP55072 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.6□□□□□ -1.67
VCPP55072 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.6□□□□□ -1.67
VCPP55072 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.6□□□□□ -1.67
VCPP55072 RN7SL600P-201ENST00000581811 299 ntBASIC4.6□□□□□ -1.67
VCPP55072 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.6□□□□□ -1.67
VCPP55072 AC068020.1-201ENST00000594215 661 ntBASIC4.6□□□□□ -1.67
VCPP55072 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.6□□□□□ -1.67
VCPP55072 AC007179.3-201ENST00000604976 235 ntBASIC4.6□□□□□ -1.67
VCPP55072 AL391834.1-201ENST00000609609 560 ntBASIC4.6□□□□□ -1.67
VCPP55072 AC016957.2-201ENST00000616998 848 ntBASIC4.6□□□□□ -1.67
VCPP55072 AL669942.2-201ENST00000620352 697 ntBASIC4.6□□□□□ -1.67
VCPP55072 AC018816.2-201ENST00000621460 353 ntBASIC4.6□□□□□ -1.67
VCPP55072 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VCPP55072 MTND4P26-201ENST00000415971 1359 ntBASIC4.6□□□□□ -1.67
VCPP55072 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.6□□□□□ -1.67
VCPP55072 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VCPP55072 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.6□□□□□ -1.67
VCPP55072 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VCPP55072 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
VCPP55072 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VCPP55072 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
VCPP55072 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VCPP55072 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.59□□□□□ -1.67
VCPP55072 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VCPP55072 AL589655.1-201ENST00000405398 482 ntBASIC4.59□□□□□ -1.67
VCPP55072 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VCPP55072 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VCPP55072 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.59□□□□□ -1.67
VCPP55072 AL139095.3-201ENST00000419672 1203 ntBASIC4.59□□□□□ -1.67
VCPP55072 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.59□□□□□ -1.67
VCPP55072 FAM204CP-201ENST00000424489 642 ntBASIC4.59□□□□□ -1.67
VCPP55072 DPY19L1P2-201ENST00000426647 915 ntBASIC4.59□□□□□ -1.67
VCPP55072 DYNLL1P7-201ENST00000429273 258 ntBASIC4.59□□□□□ -1.67
VCPP55072 RPEP2-201ENST00000432149 701 ntBASIC4.59□□□□□ -1.67
VCPP55072 MRPS33P4-201ENST00000434892 317 ntBASIC4.59□□□□□ -1.67
VCPP55072 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.59□□□□□ -1.67
VCPP55072 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.59□□□□□ -1.67
VCPP55072 AL513343.1-201ENST00000451818 792 ntBASIC4.59□□□□□ -1.67
VCPP55072 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.59□□□□□ -1.67
VCPP55072 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VCPP55072 PCNAP1-201ENST00000505363 709 ntBASIC4.59□□□□□ -1.67
VCPP55072 PPBPP1-201ENST00000510807 373 ntBASIC4.59□□□□□ -1.67
VCPP55072 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VCPP55072 MYL12AP1-201ENST00000518490 515 ntBASIC4.59□□□□□ -1.67
VCPP55072 OR4V1P-201ENST00000525394 1140 ntBASIC4.59□□□□□ -1.67
VCPP55072 AC074029.2-201ENST00000551045 634 ntBASIC4.59□□□□□ -1.67
VCPP55072 AC084757.1-201ENST00000559987 490 ntBASIC4.59□□□□□ -1.67
VCPP55072 AC092868.3-201ENST00000560515 784 ntBASIC4.59□□□□□ -1.67
VCPP55072 NPM1P47-201ENST00000560843 856 ntBASIC4.59□□□□□ -1.67
VCPP55072 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.59□□□□□ -1.67
VCPP55072 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.59□□□□□ -1.67
VCPP55072 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.59□□□□□ -1.67
VCPP55072 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VCPP55072 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.59□□□□□ -1.67
VCPP55072 RPL23AP61-201ENST00000623642 466 ntBASIC4.59□□□□□ -1.67
VCPP55072 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.59□□□□□ -1.67
VCPP55072 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.59□□□□□ -1.67
VCPP55072 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.59□□□□□ -1.67
VCPP55072 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
VCPP55072 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VCPP55072 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
VCPP55072 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VCPP55072 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VCPP55072 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VCPP55072 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VCPP55072 MIR331-201ENST00000362302 94 ntBASIC4.58□□□□□ -1.68
VCPP55072 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.58□□□□□ -1.68
VCPP55072 MIR491-201ENST00000384877 84 ntBASIC4.58□□□□□ -1.68
VCPP55072 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.58□□□□□ -1.68
VCPP55072 AL583835.1-201ENST00000399570 407 ntBASIC4.58□□□□□ -1.68
VCPP55072 RN7SKP177-201ENST00000410567 355 ntBASIC4.58□□□□□ -1.68
VCPP55072 RPS20P14-201ENST00000412545 360 ntBASIC4.58□□□□□ -1.68
VCPP55072 GSTM3P2-201ENST00000412746 530 ntBASIC4.58□□□□□ -1.68
VCPP55072 AL450992.3-201ENST00000413192 568 ntBASIC4.58□□□□□ -1.68
VCPP55072 AL138785.1-201ENST00000425821 331 ntBASIC4.58□□□□□ -1.68
VCPP55072 AL590623.1-201ENST00000427864 105 ntBASIC4.58□□□□□ -1.68
VCPP55072 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VCPP55072 BTBD7P2-201ENST00000441962 620 ntBASIC4.58□□□□□ -1.68
VCPP55072 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.58□□□□□ -1.68
VCPP55072 TPRKBP1-201ENST00000456243 481 ntBASIC4.58□□□□□ -1.68
VCPP55072 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.58□□□□□ -1.68
VCPP55072 PRELID3BP7-201ENST00000503606 469 ntBASIC4.58□□□□□ -1.68
VCPP55072 RNA5SP497-201ENST00000516081 97 ntBASIC4.58□□□□□ -1.68
VCPP55072 RNU6-491P-201ENST00000516099 110 ntBASIC4.58□□□□□ -1.68
VCPP55072 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.58□□□□□ -1.68
VCPP55072 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.58□□□□□ -1.68
VCPP55072 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.58□□□□□ -1.68
VCPP55072 AC012414.2-201ENST00000559474 187 ntBASIC4.58□□□□□ -1.68
VCPP55072 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms