Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS2P54868 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCS2P54868 CYCSP43-201ENST00000438233 310 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 RANP8-201ENST00000444720 713 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 C1DP3-201ENST00000455013 423 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS2P54868 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
HMGCS2P54868 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCS2P54868 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCS2P54868 OR8I1P-201ENST00000529291 931 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.53□□□□□ -1.68
HMGCS2P54868 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCS2P54868 AL390334.1-201ENST00000556395 450 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS2P54868 SULT1C2P2-201ENST00000562517 294 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 DPRXP4-201ENST00000578053 568 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS2P54868 AC015802.5-201ENST00000607478 399 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCS2P54868 AC023509.5-201ENST00000617434 807 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AC009032.1-201ENST00000617574 431 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AC006213.5-201ENST00000619673 288 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AL139089.1-201ENST00000620372 975 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AC124312.6-202ENST00000623624 418 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 AC073592.7-201ENST00000623659 507 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS2P54868 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS2P54868 OR51C1P-202ENST00000641159 1444 ntBASIC4.53□□□□□ -1.68
HMGCS2P54868 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS2P54868 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
HMGCS2P54868 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HMGCS2P54868 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCS2P54868 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HMGCS2P54868 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS2P54868 AL359643.1-201ENST00000404109 423 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AL136131.1-201ENST00000406079 803 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 MIR1251-201ENST00000408552 70 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
HMGCS2P54868 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCS2P54868 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCS2P54868 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCS2P54868 AC013470.3-201ENST00000420252 1194 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AJ239321.1-201ENST00000424255 564 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCS2P54868 Z74696.2-201ENST00000436514 498 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AC114878.1-201ENST00000441166 358 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AL589765.3-201ENST00000446084 462 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AL451050.1-201ENST00000450126 415 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCS2P54868 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCS2P54868 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS2P54868 HMGN1P11-201ENST00000508668 303 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AC104619.4-201ENST00000510773 249 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCS2P54868 IGLV3-26-201ENST00000520756 302 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 OR10D4P-201ENST00000525892 951 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AP003168.1-201ENST00000530091 307 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCS2P54868 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCS2P54868 AC007599.1-201ENST00000568688 1174 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 FAM106CP-201ENST00000582212 507 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCS2P54868 MIR3936-201ENST00000584304 110 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCS2P54868 AC015967.1-201ENST00000619893 476 ntBASIC4.52□□□□□ -1.69
HMGCS2P54868 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HMGCS2P54868 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS2P54868 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS2P54868 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS2P54868 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS2P54868 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCS2P54868 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS2P54868 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGCS2P54868 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGCS2P54868 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGCS2P54868 VDAC2P1-201ENST00000399358 958 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGCS2P54868 RPS29P4-201ENST00000414733 161 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 MTCO1P57-201ENST00000432182 261 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 TPT1P1-201ENST00000458495 518 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 RNA5SP103-201ENST00000459503 118 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGCS2P54868 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGCS2P54868 RN7SL271P-201ENST00000487601 295 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 DEFB109F-201ENST00000491870 277 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGCS2P54868 AC022695.1-201ENST00000522089 237 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGCS2P54868 AC109635.6-201ENST00000525487 1113 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGCS2P54868 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGCS2P54868 AL731537.2-201ENST00000561565 951 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGCS2P54868 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGCS2P54868 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.51□□□□□ -1.69
HMGCS2P54868 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.51□□□□□ -1.69
HMGCS2P54868 AC244505.7-201ENST00000599675 272 ntBASIC4.51□□□□□ -1.69
HMGCS2P54868 AC104662.1-201ENST00000604448 511 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms