Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCN3P51790 CYB5AP5-201ENST00000549779 389 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AC025884.1-201ENST00000556034 378 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCN3P51790 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCN3P51790 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCN3P51790 MIR4789-201ENST00000577469 82 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCN3P51790 VN1R84P-201ENST00000593697 235 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 VN1R87P-201ENST00000596706 487 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AC092653.1-201ENST00000608509 531 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AC139769.3-201ENST00000618383 175 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AC022079.2-201ENST00000619739 566 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AC022106.2-201ENST00000620114 757 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AL023881.1-201ENST00000621088 301 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCN3P51790 AC015813.6-201ENST00000624409 5808 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLCN3P51790 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCN3P51790 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCN3P51790 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLCN3P51790 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
CLCN3P51790 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 AL133268.1-201ENST00000405676 1401 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCN3P51790 AC006971.1-201ENST00000407916 4486 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCN3P51790 RNU5B-1-201ENST00000363286 116 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 RNU6-236P-201ENST00000363886 106 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 MIR1271-201ENST00000408537 86 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCN3P51790 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCN3P51790 LIPT1P1-201ENST00000415870 1186 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 RPL23AP38-201ENST00000423801 469 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 RPS27AP12-201ENST00000429552 465 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 CDY14P-201ENST00000431260 1014 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 RPEP2-201ENST00000432149 701 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 AC092170.1-201ENST00000440211 356 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 CDY12P-201ENST00000440679 1015 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 CDY13P-201ENST00000445813 1015 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 CDY23P-201ENST00000451661 1014 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCN3P51790 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCN3P51790 RPL35P6-201ENST00000490024 372 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCN3P51790 SUMO2P5-201ENST00000506790 245 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCN3P51790 RNA5SP49-201ENST00000516450 115 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AC068714.1-201ENST00000559623 800 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AL049838.1-201ENST00000563647 981 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCN3P51790 AL606834.3-201ENST00000602615 496 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AC023043.4-201ENST00000612081 449 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AC048344.4-201ENST00000619744 527 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 AL445363.3-201ENST00000623080 671 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCN3P51790 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.81□□□□□ -1.64
CLCN3P51790 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 AC006042.3-201ENST00000454684 1469 ntBASIC4.81□□□□□ -1.64
CLCN3P51790 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCN3P51790 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCN3P51790 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLCN3P51790 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 AP000756.2-201ENST00000624168 2567 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CLCN3P51790 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCN3P51790 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCN3P51790 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLCN3P51790 RNA5SP28-201ENST00000363841 119 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 RNU6-304P-201ENST00000364855 107 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 RNU6-317P-201ENST00000384031 107 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 U6.112-201ENST00000384129 70 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 RNU6-298P-201ENST00000390888 96 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 MIR1193-201ENST00000408109 78 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCN3P51790 AC092745.2-202ENST00000411880 369 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 MTCO2P8-201ENST00000412213 658 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC062016.2-201ENST00000420950 676 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCN3P51790 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCN3P51790 AC114973.1-201ENST00000429057 632 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 RPL23AP25-201ENST00000430973 463 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC002542.1-201ENST00000440683 193 ntBASIC4.8□□□□□ -1.64
CLCN3P51790 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCN3P51790 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCN3P51790 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCN3P51790 RPS4XP6-201ENST00000477670 797 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms