Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RNF144AP50876 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
RNF144AP50876 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF144AP50876 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF144AP50876 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RNF144AP50876 RNA5SP429-201ENST00000363688 109 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 Y_RNA.252-201ENST00000364556 101 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 RNU6-444P-201ENST00000383988 108 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 RNY1P14-201ENST00000384426 108 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 RNA5SP35-201ENST00000391257 129 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 RNA5SP53-201ENST00000391299 120 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AL356421.1-201ENST00000403255 413 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 RNU2-29P-201ENST00000410423 189 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 RNU4-6P-201ENST00000410804 122 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 RNU2-64P-201ENST00000411315 191 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 VDAC1P9-201ENST00000412766 841 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF144AP50876 AC080125.1-201ENST00000414888 684 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 SKA2P1-201ENST00000425592 390 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF144AP50876 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF144AP50876 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF144AP50876 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF144AP50876 RPS26P40-201ENST00000435209 294 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AC093156.1-201ENST00000440382 670 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF144AP50876 PCNPP5-201ENST00000452246 481 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AC019084.1-201ENST00000457337 432 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AC083806.1-201ENST00000468934 316 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 RPL23AP72-201ENST00000492447 435 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 RPS26P24-201ENST00000497656 331 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AC008638.1-201ENST00000506035 866 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AC092436.1-201ENST00000506450 503 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 PRMT5P1-201ENST00000514351 598 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF144AP50876 RNA5SP116-201ENST00000516132 98 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 IGLVV-66-201ENST00000523818 341 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 TRIM51DP-201ENST00000529746 596 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 NDUFA3P2-201ENST00000531434 232 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF144AP50876 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
RNF144AP50876 AC011611.6-201ENST00000547483 255 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.36□□□□□ -1.39
RNF144AP50876 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF144AP50876 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.36□□□□□ -1.39
RNF144AP50876 AL353997.4-201ENST00000586196 166 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.36□□□□□ -1.39
RNF144AP50876 AL035410.2-201ENST00000604963 864 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AL121612.2-201ENST00000612261 482 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.36□□□□□ -1.39
RNF144AP50876 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF144AP50876 AC140479.4-205ENST00000636339 820 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AL669831.3-213ENST00000636676 183 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 AL354702.2-202ENST00000641481 890 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
RNF144AP50876 CLCA3P-203ENST00000490028 2781 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
RNF144AP50876 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF144AP50876 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.36□□□□□ -1.39
RNF144AP50876 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF144AP50876 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF144AP50876 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
RNF144AP50876 AL442128.2-201ENST00000620246 1824 ntBASIC6.36□□□□□ -1.39
RNF144AP50876 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RNF144AP50876 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
RNF144AP50876 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF144AP50876 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
RNF144AP50876 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF144AP50876 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.35□□□□□ -1.39
RNF144AP50876 MTCO1P7-201ENST00000419523 1542 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.35□□□□□ -1.39
RNF144AP50876 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.35□□□□□ -1.39
RNF144AP50876 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 DLEU2L-201ENST00000371086 3555 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.35□□□□□ -1.39
RNF144AP50876 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 Y_RNA.80-201ENST00000362996 102 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 SNORA62.1-201ENST00000364287 154 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RNF144AP50876 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 RNU6-39P-201ENST00000384344 107 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 MIR541-201ENST00000401360 84 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.35□□□□□ -1.39
RNF144AP50876 RPL36AP36-201ENST00000418616 301 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 PPIAP23-201ENST00000420099 497 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 AC007365.2-201ENST00000428806 458 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 DNAJC19P5-201ENST00000443295 316 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF144AP50876 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF144AP50876 MTCO3P2-201ENST00000457365 171 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF144AP50876 AC068781.1-201ENST00000488231 618 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 RPL10P7-201ENST00000495649 625 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 RN7SL143P-201ENST00000496780 297 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 AC091849.1-201ENST00000509920 121 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 AC138517.1-201ENST00000515724 568 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms