Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 Z99497.1-201ENST00000421282 135 ntBASIC4.49□□□□□ -1.69
SOX2P48431 MTCO3P1-205ENST00000422088 832 ntBASIC4.49□□□□□ -1.69
SOX2P48431 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AL139148.1-201ENST00000427122 680 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 USP9YP28-201ENST00000435142 589 ntBASIC4.49□□□□□ -1.69
SOX2P48431 RPS29P10-201ENST00000439197 166 ntBASIC4.49□□□□□ -1.69
SOX2P48431 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 AL390119.1-201ENST00000440329 312 ntBASIC4.49□□□□□ -1.69
SOX2P48431 MTND1P30-201ENST00000441241 901 ntBASIC4.49□□□□□ -1.69
SOX2P48431 RPS11P7-201ENST00000442125 465 ntBASIC4.49□□□□□ -1.69
SOX2P48431 RAB11AP1-201ENST00000442978 646 ntBASIC4.49□□□□□ -1.69
SOX2P48431 RPL7AP61-201ENST00000443410 636 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 AC108463.1-201ENST00000450258 347 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX2P48431 NDUFA5P7-201ENST00000452914 242 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX2P48431 NDUFA12P1-201ENST00000455914 406 ntBASIC4.49□□□□□ -1.69
SOX2P48431 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX2P48431 RN7SL168P-201ENST00000463821 279 ntBASIC4.49□□□□□ -1.69
SOX2P48431 RPL21P71-201ENST00000465598 459 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC068724.1-201ENST00000487100 792 ntBASIC4.49□□□□□ -1.69
SOX2P48431 RPL7P38-201ENST00000488396 739 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC097173.1-201ENST00000505862 819 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC010424.1-201ENST00000506336 297 ntBASIC4.49□□□□□ -1.69
SOX2P48431 Y_RNA.695-201ENST00000516715 107 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.49□□□□□ -1.69
SOX2P48431 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 AC107918.3-201ENST00000533272 382 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SOX2P48431 TRAV15-201ENST00000556680 249 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 RPL10P14-201ENST00000565265 298 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC015720.2-201ENST00000567709 334 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 MIR4505-201ENST00000582238 73 ntBASIC4.49□□□□□ -1.69
SOX2P48431 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.49□□□□□ -1.69
SOX2P48431 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.49□□□□□ -1.69
SOX2P48431 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 VN1R92P-201ENST00000598511 928 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.49□□□□□ -1.69
SOX2P48431 AL355816.1-201ENST00000607951 118 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AL353600.1-201ENST00000608148 251 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC015914.2-201ENST00000618167 288 ntBASIC4.49□□□□□ -1.69
SOX2P48431 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 AC026634.1-201ENST00000634369 198 ntBASIC4.49□□□□□ -1.69
SOX2P48431 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX2P48431 AC107068.1-201ENST00000563286 4218 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SOX2P48431 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 KARSP3-201ENST00000571212 1504 ntBASIC4.48□□□□□ -1.69
SOX2P48431 OR13C1P-202ENST00000641378 2919 ntBASIC4.48□□□□□ -1.69
SOX2P48431 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SOX2P48431 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 RNA5SP335-201ENST00000363817 110 ntBASIC4.48□□□□□ -1.69
SOX2P48431 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SOX2P48431 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SOX2P48431 ATP5F1P4-201ENST00000397288 746 ntBASIC4.48□□□□□ -1.69
SOX2P48431 MIR1284-201ENST00000408337 120 ntBASIC4.48□□□□□ -1.69
SOX2P48431 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 FCF1P2-201ENST00000415284 583 ntBASIC4.48□□□□□ -1.69
SOX2P48431 RPS3P2-201ENST00000421346 701 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AC007394.1-201ENST00000421941 531 ntBASIC4.48□□□□□ -1.69
SOX2P48431 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 AC002069.1-201ENST00000429649 1159 ntBASIC4.48□□□□□ -1.69
SOX2P48431 DLGAP5P1-201ENST00000430307 464 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 AL137845.2-201ENST00000444292 988 ntBASIC4.48□□□□□ -1.69
SOX2P48431 BTF3P6-201ENST00000448054 499 ntBASIC4.48□□□□□ -1.69
SOX2P48431 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 AL356981.1-201ENST00000454879 684 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms