Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.98□□□□□ -1.77
CDX1P47902 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.98□□□□□ -1.77
CDX1P47902 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
CDX1P47902 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDX1P47902 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
CDX1P47902 MTND5P28-201ENST00000438005 1594 ntBASIC3.97□□□□□ -1.77
CDX1P47902 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CDX1P47902 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDX1P47902 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDX1P47902 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDX1P47902 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDX1P47902 RNU1-85P-201ENST00000364127 164 ntBASIC3.97□□□□□ -1.77
CDX1P47902 RNA5SP513-201ENST00000364648 118 ntBASIC3.97□□□□□ -1.77
CDX1P47902 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CDX1P47902 MIR550A3-201ENST00000390735 95 ntBASIC3.97□□□□□ -1.77
CDX1P47902 FABP12P1-201ENST00000401911 322 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AL078604.1-201ENST00000404609 466 ntBASIC3.97□□□□□ -1.77
CDX1P47902 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.97□□□□□ -1.77
CDX1P47902 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AL450992.3-201ENST00000413192 568 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 AC233981.1-201ENST00000423224 461 ntBASIC3.97□□□□□ -1.77
CDX1P47902 CKS1BP6-201ENST00000424932 240 ntBASIC3.97□□□□□ -1.77
CDX1P47902 C1DP1-201ENST00000426049 402 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 ELOCP6-201ENST00000429066 328 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 RPL12P3-201ENST00000440080 396 ntBASIC3.97□□□□□ -1.77
CDX1P47902 MTCO1P53-201ENST00000441633 699 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.97□□□□□ -1.77
CDX1P47902 MRPL48P1-201ENST00000445390 636 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 IGHV5-78-201ENST00000450948 295 ntBASIC3.97□□□□□ -1.77
CDX1P47902 RPL7P61-201ENST00000451721 751 ntBASIC3.97□□□□□ -1.77
CDX1P47902 NDUFA5P7-201ENST00000452914 242 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.97□□□□□ -1.77
CDX1P47902 ELOCP12-201ENST00000458706 328 ntBASIC3.97□□□□□ -1.77
CDX1P47902 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.97□□□□□ -1.77
CDX1P47902 RPL37P6-202ENST00000464216 403 ntBASIC3.97□□□□□ -1.77
CDX1P47902 RN7SL443P-201ENST00000464331 290 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 DYNLL1P6-201ENST00000503440 264 ntBASIC3.97□□□□□ -1.77
CDX1P47902 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 COX6B1P5-201ENST00000509843 249 ntBASIC3.97□□□□□ -1.77
CDX1P47902 TPT1P8-201ENST00000510120 555 ntBASIC3.97□□□□□ -1.77
CDX1P47902 RN7SKP157-201ENST00000516174 282 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.97□□□□□ -1.77
CDX1P47902 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.97□□□□□ -1.77
CDX1P47902 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.97□□□□□ -1.77
CDX1P47902 OR5D15P-201ENST00000531671 942 ntBASIC3.97□□□□□ -1.77
CDX1P47902 OR7E128P-201ENST00000532736 1024 ntBASIC3.97□□□□□ -1.77
CDX1P47902 OR8K4P-201ENST00000534608 872 ntBASIC3.97□□□□□ -1.77
CDX1P47902 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.97□□□□□ -1.77
CDX1P47902 MTND6P33-201ENST00000571794 183 ntBASIC3.97□□□□□ -1.77
CDX1P47902 CYCSP40-201ENST00000575927 294 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.97□□□□□ -1.77
CDX1P47902 AC091057.3-201ENST00000602684 733 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AP003973.1-201ENST00000604639 691 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC115621.1-201ENST00000604653 858 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC005084.1-201ENST00000605160 304 ntBASIC3.97□□□□□ -1.77
CDX1P47902 HSPE1P14-201ENST00000605812 302 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AP003117.2-201ENST00000606010 545 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC133644.2-201ENST00000608142 540 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC099669.2-201ENST00000616549 437 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.97□□□□□ -1.77
CDX1P47902 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AC104985.3-201ENST00000623479 597 ntBASIC3.97□□□□□ -1.77
CDX1P47902 AL353662.3-201ENST00000625131 237 ntBASIC3.97□□□□□ -1.77
CDX1P47902 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDX1P47902 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.97□□□□□ -1.77
CDX1P47902 AL445487.1-201ENST00000415694 1580 ntBASIC3.97□□□□□ -1.77
CDX1P47902 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.97□□□□□ -1.77
CDX1P47902 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDX1P47902 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
CDX1P47902 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.77
CDX1P47902 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
CDX1P47902 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.96□□□□□ -1.78
CDX1P47902 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CDX1P47902 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.96□□□□□ -1.78
CDX1P47902 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 MIR93-201ENST00000385024 80 ntBASIC3.96□□□□□ -1.78
CDX1P47902 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 MTCO1P56-201ENST00000401674 224 ntBASIC3.96□□□□□ -1.78
CDX1P47902 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 ZNF603P-201ENST00000405613 487 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.96□□□□□ -1.78
CDX1P47902 GJA6P-201ENST00000415117 1042 ntBASIC3.96□□□□□ -1.78
CDX1P47902 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.96□□□□□ -1.78
CDX1P47902 RPP40P1-201ENST00000426762 456 ntBASIC3.96□□□□□ -1.78
CDX1P47902 OR4F13P-201ENST00000428478 931 ntBASIC3.96□□□□□ -1.78
CDX1P47902 RBMY2QP-201ENST00000429799 1147 ntBASIC3.96□□□□□ -1.78
CDX1P47902 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.96□□□□□ -1.78
CDX1P47902 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms