Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 RNA5SP197-201ENST00000363357 119 ntBASIC3.91□□□□□ -1.78
HTTP42858 RNA5SP293-201ENST00000410527 113 ntBASIC3.91□□□□□ -1.78
HTTP42858 AC108022.1-201ENST00000493466 478 ntBASIC3.91□□□□□ -1.78
HTTP42858 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.91□□□□□ -1.78
HTTP42858 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.91□□□□□ -1.78
HTTP42858 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.91□□□□□ -1.78
HTTP42858 IGHV3-29-201ENST00000604817 344 ntBASIC3.91□□□□□ -1.78
HTTP42858 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.91□□□□□ -1.78
HTTP42858 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 RNA5SP187-201ENST00000384400 119 ntBASIC3.91□□□□□ -1.78
HTTP42858 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.91□□□□□ -1.78
HTTP42858 HMGB1P5-202ENST00000451497 985 ntBASIC3.91□□□□□ -1.78
HTTP42858 AC105227.2-201ENST00000615075 605 ntBASIC3.91□□□□□ -1.78
HTTP42858 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.91□□□□□ -1.78
HTTP42858 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.91□□□□□ -1.78
HTTP42858 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 AL117339.4-201ENST00000608335 7063 ntBASIC3.91□□□□□ -1.78
HTTP42858 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.91□□□□□ -1.78
HTTP42858 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HTTP42858 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
HTTP42858 UBA52P3-201ENST00000491303 382 ntBASIC3.9□□□□□ -1.78
HTTP42858 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.9□□□□□ -1.78
HTTP42858 AC138938.1-201ENST00000515431 782 ntBASIC3.9□□□□□ -1.78
HTTP42858 IGLV3-26-201ENST00000520756 302 ntBASIC3.9□□□□□ -1.78
HTTP42858 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HTTP42858 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.9□□□□□ -1.78
HTTP42858 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HTTP42858 AC005183.1-201ENST00000603687 1979 ntBASIC3.9□□□□□ -1.78
HTTP42858 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
HTTP42858 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
HTTP42858 AC010401.2-201ENST00000575137 4934 ntBASIC3.9□□□□□ -1.78
HTTP42858 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HTTP42858 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.9□□□□□ -1.78
HTTP42858 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HTTP42858 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
HTTP42858 SNORA54-201ENST00000384281 123 ntBASIC3.9□□□□□ -1.79
HTTP42858 AL358178.1-201ENST00000407698 397 ntBASIC3.9□□□□□ -1.79
HTTP42858 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.9□□□□□ -1.79
HTTP42858 HIGD1AP3-201ENST00000515857 278 ntBASIC3.9□□□□□ -1.79
HTTP42858 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.9□□□□□ -1.79
HTTP42858 AC015802.5-201ENST00000607478 399 ntBASIC3.9□□□□□ -1.79
HTTP42858 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.9□□□□□ -1.79
HTTP42858 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.9□□□□□ -1.79
HTTP42858 SMG1P4-204ENST00000523028 4131 ntBASIC3.9□□□□□ -1.79
HTTP42858 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HTTP42858 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
HTTP42858 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HTTP42858 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HTTP42858 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HTTP42858 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HTTP42858 AL132656.3-201ENST00000606384 1595 ntBASIC3.9□□□□□ -1.79
HTTP42858 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HTTP42858 OR5J1P-201ENST00000313544 939 ntBASIC3.9□□□□□ -1.79
HTTP42858 AL035458.1-201ENST00000433096 585 ntBASIC3.9□□□□□ -1.79
HTTP42858 AL353705.1-201ENST00000433468 480 ntBASIC3.9□□□□□ -1.79
HTTP42858 AC009963.4-201ENST00000448535 339 ntBASIC3.9□□□□□ -1.79
HTTP42858 VN1R40P-201ENST00000455196 941 ntBASIC3.9□□□□□ -1.79
HTTP42858 RNA5SP116-201ENST00000516132 98 ntBASIC3.9□□□□□ -1.79
HTTP42858 AL512310.1-201ENST00000548639 172 ntBASIC3.9□□□□□ -1.79
HTTP42858 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.9□□□□□ -1.79
HTTP42858 MIR8069-1-201ENST00000616627 86 ntBASIC3.9□□□□□ -1.79
HTTP42858 MIR8069-2-201ENST00000621412 86 ntBASIC3.9□□□□□ -1.79
HTTP42858 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HTTP42858 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HTTP42858 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HTTP42858 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HTTP42858 GDA-209ENST00000545168 5362 ntTSL 2 BASIC3.89□□□□□ -1.79
HTTP42858 MIR195-201ENST00000385194 87 ntBASIC3.89□□□□□ -1.79
HTTP42858 VDAC2P1-201ENST00000399358 958 ntBASIC3.89□□□□□ -1.79
HTTP42858 RN7SKP97-201ENST00000410966 333 ntBASIC3.89□□□□□ -1.79
HTTP42858 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.89□□□□□ -1.79
HTTP42858 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.89□□□□□ -1.79
HTTP42858 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.89□□□□□ -1.79
HTTP42858 AL590240.3-201ENST00000621416 943 ntBASIC3.89□□□□□ -1.79
HTTP42858 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HTTP42858 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC3.89□□□□□ -1.79
HTTP42858 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.89□□□□□ -1.79
HTTP42858 NACAP7-201ENST00000407371 609 ntBASIC3.89□□□□□ -1.79
HTTP42858 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.89□□□□□ -1.79
HTTP42858 AC105272.1-201ENST00000438604 198 ntBASIC3.89□□□□□ -1.79
HTTP42858 AC000041.1-201ENST00000439655 175 ntBASIC3.89□□□□□ -1.79
HTTP42858 AC239809.1-201ENST00000450470 217 ntBASIC3.89□□□□□ -1.79
HTTP42858 AC108938.1-201ENST00000451204 136 ntBASIC3.89□□□□□ -1.79
HTTP42858 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.89□□□□□ -1.79
HTTP42858 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.89□□□□□ -1.79
HTTP42858 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
HTTP42858 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.89□□□□□ -1.79
HTTP42858 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HTTP42858 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.89□□□□□ -1.79
HTTP42858 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HTTP42858 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HTTP42858 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms