Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFC1P35251 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFC1P35251 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RFC1P35251 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RFC1P35251 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RFC1P35251 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RFC1P35251 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.84□□□□□ -1.63
RFC1P35251 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.84□□□□□ -1.63
RFC1P35251 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
RFC1P35251 AC120338.1-201ENST00000625074 1541 ntBASIC4.84□□□□□ -1.63
RFC1P35251 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RFC1P35251 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 ENSAP3-201ENST00000312710 333 ntBASIC4.84□□□□□ -1.63
RFC1P35251 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RFC1P35251 RNU4-51P-201ENST00000364206 140 ntBASIC4.84□□□□□ -1.63
RFC1P35251 SNORD116-12-201ENST00000384468 92 ntBASIC4.84□□□□□ -1.63
RFC1P35251 MTCO1P56-201ENST00000401674 224 ntBASIC4.84□□□□□ -1.63
RFC1P35251 DNAJC19P6-201ENST00000401853 280 ntBASIC4.84□□□□□ -1.63
RFC1P35251 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.84□□□□□ -1.63
RFC1P35251 BTF3P8-201ENST00000414577 526 ntBASIC4.84□□□□□ -1.63
RFC1P35251 RPS3AP37-201ENST00000419176 745 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AL360081.1-201ENST00000428299 555 ntBASIC4.84□□□□□ -1.63
RFC1P35251 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 AL031663.1-201ENST00000437445 219 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.84□□□□□ -1.63
RFC1P35251 MTCYBP11-201ENST00000447254 1109 ntBASIC4.84□□□□□ -1.63
RFC1P35251 IFNWP4-201ENST00000453148 294 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.84□□□□□ -1.63
RFC1P35251 ISCUP1-201ENST00000454451 448 ntBASIC4.84□□□□□ -1.63
RFC1P35251 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 AC104763.1-201ENST00000475274 360 ntBASIC4.84□□□□□ -1.63
RFC1P35251 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RFC1P35251 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC1P35251 AC007016.1-201ENST00000512110 244 ntBASIC4.84□□□□□ -1.63
RFC1P35251 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC1P35251 AC083923.1-201ENST00000523708 376 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC1P35251 AC027104.1-201ENST00000563702 681 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 ATP5F1P7-201ENST00000567330 760 ntBASIC4.84□□□□□ -1.63
RFC1P35251 MIR4716-201ENST00000579628 84 ntBASIC4.84□□□□□ -1.63
RFC1P35251 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.84□□□□□ -1.63
RFC1P35251 VN1R84P-201ENST00000593697 235 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC1P35251 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC1P35251 AC024940.4-201ENST00000605507 246 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AL353600.1-201ENST00000608148 251 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AL138478.1-201ENST00000612252 832 ntBASIC4.84□□□□□ -1.63
RFC1P35251 MIR7973-1-201ENST00000614683 76 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AC123768.4-201ENST00000616244 701 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AC010975.3-201ENST00000618727 978 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AC022079.1-201ENST00000621546 602 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AC138907.10-201ENST00000623708 983 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AC116563.2-201ENST00000624751 535 ntBASIC4.84□□□□□ -1.63
RFC1P35251 U3.53-201ENST00000628922 216 ntBASIC4.84□□□□□ -1.63
RFC1P35251 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC1P35251 CU459211.1-201ENST00000635667 749 ntBASIC4.84□□□□□ -1.63
RFC1P35251 U6.107-201ENST00000637108 79 ntBASIC4.84□□□□□ -1.63
RFC1P35251 MTND2P41-201ENST00000637599 773 ntBASIC4.84□□□□□ -1.63
RFC1P35251 BX649567.1-201ENST00000642071 1134 ntBASIC4.84□□□□□ -1.63
RFC1P35251 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
RFC1P35251 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RFC1P35251 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFC1P35251 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RFC1P35251 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RFC1P35251 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFC1P35251 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.83□□□□□ -1.64
RFC1P35251 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.83□□□□□ -1.64
RFC1P35251 SNORA62.2-201ENST00000364672 152 ntBASIC4.83□□□□□ -1.64
RFC1P35251 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFC1P35251 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RFC1P35251 RNU6-98P-201ENST00000384173 107 ntBASIC4.83□□□□□ -1.64
RFC1P35251 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RFC1P35251 MIR921-201ENST00000401133 56 ntBASIC4.83□□□□□ -1.64
RFC1P35251 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.83□□□□□ -1.64
RFC1P35251 AL513175.2-201ENST00000422071 443 ntBASIC4.83□□□□□ -1.64
RFC1P35251 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC1P35251 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC1P35251 FTH1P16-201ENST00000435241 552 ntBASIC4.83□□□□□ -1.64
RFC1P35251 NANOGP2-201ENST00000435391 727 ntBASIC4.83□□□□□ -1.64
RFC1P35251 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC1P35251 AC092170.1-201ENST00000440211 356 ntBASIC4.83□□□□□ -1.64
RFC1P35251 MTATP6P26-201ENST00000445926 662 ntBASIC4.83□□□□□ -1.64
RFC1P35251 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFC1P35251 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC1P35251 AL935212.3-201ENST00000450729 284 ntBASIC4.83□□□□□ -1.64
RFC1P35251 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC1P35251 CDC42P1-201ENST00000456658 548 ntBASIC4.83□□□□□ -1.64
RFC1P35251 RPL7P32-201ENST00000457119 744 ntBASIC4.83□□□□□ -1.64
RFC1P35251 NIP7P2-201ENST00000485801 544 ntBASIC4.83□□□□□ -1.64
RFC1P35251 AC119751.5-201ENST00000514077 770 ntBASIC4.83□□□□□ -1.64
RFC1P35251 RNA5SP446-201ENST00000515955 82 ntBASIC4.83□□□□□ -1.64
RFC1P35251 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.83□□□□□ -1.64
RFC1P35251 MTATP6P15-201ENST00000527233 835 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms