Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SHMT2P34897 AC017007.4-201ENST00000503353 1352 ntBASIC4.01□□□□□ -1.77
SHMT2P34897 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
SHMT2P34897 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHMT2P34897 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHMT2P34897 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4□□□□□ -1.77
SHMT2P34897 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHMT2P34897 ERCC6-202ENST00000374127 1782 ntBASIC4□□□□□ -1.77
SHMT2P34897 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SHMT2P34897 AL049555.1-201ENST00000562834 1933 ntBASIC4□□□□□ -1.77
SHMT2P34897 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHMT2P34897 OR11H4-201ENST00000315409 1082 ntBASIC4□□□□□ -1.77
SHMT2P34897 RNU11-4P-201ENST00000391149 133 ntBASIC4□□□□□ -1.77
SHMT2P34897 AL589655.1-201ENST00000405398 482 ntBASIC4□□□□□ -1.77
SHMT2P34897 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4□□□□□ -1.77
SHMT2P34897 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4□□□□□ -1.77
SHMT2P34897 EIF2S2P3-201ENST00000428356 999 ntBASIC4□□□□□ -1.77
SHMT2P34897 AC004975.1-201ENST00000428733 208 ntBASIC4□□□□□ -1.77
SHMT2P34897 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4□□□□□ -1.77
SHMT2P34897 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4□□□□□ -1.77
SHMT2P34897 RSL24D1P8-201ENST00000434442 492 ntBASIC4□□□□□ -1.77
SHMT2P34897 RPL12P46-201ENST00000436610 195 ntBASIC4□□□□□ -1.77
SHMT2P34897 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4□□□□□ -1.77
SHMT2P34897 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4□□□□□ -1.77
SHMT2P34897 MTND2P3-201ENST00000452458 470 ntBASIC4□□□□□ -1.77
SHMT2P34897 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4□□□□□ -1.77
SHMT2P34897 AC021205.1-201ENST00000468797 348 ntBASIC4□□□□□ -1.77
SHMT2P34897 AC006517.1-201ENST00000480485 328 ntBASIC4□□□□□ -1.77
SHMT2P34897 HAUS1P1-201ENST00000505275 832 ntBASIC4□□□□□ -1.77
SHMT2P34897 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4□□□□□ -1.77
SHMT2P34897 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHMT2P34897 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4□□□□□ -1.77
SHMT2P34897 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4□□□□□ -1.77
SHMT2P34897 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4□□□□□ -1.77
SHMT2P34897 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4□□□□□ -1.77
SHMT2P34897 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4□□□□□ -1.77
SHMT2P34897 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4□□□□□ -1.77
SHMT2P34897 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHMT2P34897 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4□□□□□ -1.77
SHMT2P34897 AC020910.2-201ENST00000603635 610 ntBASIC4□□□□□ -1.77
SHMT2P34897 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4□□□□□ -1.77
SHMT2P34897 RNU4-89P-201ENST00000607443 133 ntBASIC4□□□□□ -1.77
SHMT2P34897 AC015802.5-201ENST00000607478 399 ntBASIC4□□□□□ -1.77
SHMT2P34897 AL731566.2-201ENST00000618971 317 ntBASIC4□□□□□ -1.77
SHMT2P34897 AL356121.2-201ENST00000624715 780 ntBASIC4□□□□□ -1.77
SHMT2P34897 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4□□□□□ -1.77
SHMT2P34897 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
SHMT2P34897 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4□□□□□ -1.77
SHMT2P34897 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4□□□□□ -1.77
SHMT2P34897 AC093311.1-201ENST00000506586 2021 ntBASIC4□□□□□ -1.77
SHMT2P34897 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4□□□□□ -1.77
SHMT2P34897 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHMT2P34897 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHMT2P34897 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.99□□□□□ -1.77
SHMT2P34897 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.99□□□□□ -1.77
SHMT2P34897 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHMT2P34897 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHMT2P34897 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHMT2P34897 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.99□□□□□ -1.77
SHMT2P34897 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SHMT2P34897 AP000357.1-201ENST00000409926 1165 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 RNA5SP317-201ENST00000410176 116 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 RNA5SP311-201ENST00000411290 116 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 RPS26P47-201ENST00000427219 348 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.99□□□□□ -1.77
SHMT2P34897 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.99□□□□□ -1.77
SHMT2P34897 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.99□□□□□ -1.77
SHMT2P34897 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.99□□□□□ -1.77
SHMT2P34897 AC006011.1-201ENST00000442758 349 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.99□□□□□ -1.77
SHMT2P34897 MTND2P25-201ENST00000449028 610 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 AC243772.1-201ENST00000451620 410 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 AL513343.1-201ENST00000451818 792 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.99□□□□□ -1.77
SHMT2P34897 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.99□□□□□ -1.77
SHMT2P34897 AC103987.1-201ENST00000473394 348 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.99□□□□□ -1.77
SHMT2P34897 AC018797.3-201ENST00000513388 1241 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.99□□□□□ -1.77
SHMT2P34897 RNA5SP315-201ENST00000516340 116 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 RNU6-1308P-201ENST00000516817 103 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 RNA5SP312-201ENST00000517068 116 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.99□□□□□ -1.77
SHMT2P34897 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.99□□□□□ -1.77
SHMT2P34897 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHMT2P34897 AC107016.1-201ENST00000550463 337 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.99□□□□□ -1.77
SHMT2P34897 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.99□□□□□ -1.77
SHMT2P34897 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.99□□□□□ -1.77
SHMT2P34897 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.99□□□□□ -1.77
SHMT2P34897 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.99□□□□□ -1.77
SHMT2P34897 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.99□□□□□ -1.77
SHMT2P34897 HMGB1P50-201ENST00000605814 607 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.99□□□□□ -1.77
SHMT2P34897 AC078899.5-201ENST00000612475 178 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 MIR7151-201ENST00000617477 60 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 AC145207.9-201ENST00000623802 325 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 AC112484.5-201ENST00000624189 228 ntBASIC3.99□□□□□ -1.77
SHMT2P34897 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHMT2P34897 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms