Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AL356489.2-201ENST00000566968 3528 ntBASIC4.34□□□□□ -1.72
PTPN4P29074 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.34□□□□□ -1.72
PTPN4P29074 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN4P29074 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN4P29074 AC090229.1-201ENST00000590983 1609 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC092162.3-201ENST00000624511 1624 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 MFSD8-220ENST00000641243 1422 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC021146.4-201ENST00000309229 279 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN4P29074 RAC1P3-201ENST00000416129 580 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN4P29074 AC092647.1-201ENST00000420654 287 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 RAD23BP1-201ENST00000421404 1227 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AL391219.1-201ENST00000422570 483 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN4P29074 RPL7AP25-201ENST00000423357 805 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC009963.2-201ENST00000453431 138 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC010618.1-201ENST00000469924 477 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC109327.1-201ENST00000471666 403 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN4P29074 AC025459.1-201ENST00000504072 156 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC025554.1-201ENST00000505641 188 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC103833.1-201ENST00000517442 172 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
PTPN4P29074 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN4P29074 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN4P29074 AC138701.1-201ENST00000524329 714 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 DEFB109D-201ENST00000529497 240 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPN4P29074 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN4P29074 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN4P29074 AC106785.3-201ENST00000564064 847 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPN4P29074 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN4P29074 AC023575.1-201ENST00000580510 358 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPN4P29074 AC115621.1-201ENST00000604653 858 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 HMGB1P50-201ENST00000605814 607 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC010857.1-201ENST00000606398 594 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AC090948.1-201ENST00000607464 549 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 AL355802.4-201ENST00000607635 548 ntBASIC4.33□□□□□ -1.72
PTPN4P29074 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN4P29074 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPN4P29074 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN4P29074 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN4P29074 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPN4P29074 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN4P29074 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN4P29074 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN4P29074 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN4P29074 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN4P29074 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN4P29074 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PTPN4P29074 MTND4P31-201ENST00000425607 1343 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN4P29074 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN4P29074 OR4K17-201ENST00000315543 1032 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
PTPN4P29074 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN4P29074 UBE2V1P15-201ENST00000407776 448 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 RNU2-17P-201ENST00000410290 190 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 TATDN1P1-201ENST00000414123 891 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN4P29074 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN4P29074 MTCO3P43-201ENST00000440974 771 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 RPL21P126-201ENST00000470049 478 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 S100A11P1-201ENST00000477525 312 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 AC106806.2-201ENST00000509365 500 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.32□□□□□ -1.72
PTPN4P29074 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN4P29074 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN4P29074 AP000827.1-201ENST00000527814 258 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 AP003168.1-201ENST00000530091 307 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN4P29074 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN4P29074 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN4P29074 AC135178.6-201ENST00000605314 398 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 AP004607.9-201ENST00000618202 316 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 AC011944.2-201ENST00000624440 683 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 AC008785.1-201ENST00000624475 456 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN4P29074 AC009452.1-201ENST00000640823 606 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 AL163152.1-201ENST00000642001 374 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPN4P29074 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.32□□□□□ -1.72
PTPN4P29074 MFSD8-242ENST00000641690 4199 ntBASIC4.32□□□□□ -1.72
PTPN4P29074 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPN4P29074 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPN4P29074 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPN4P29074 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PTPN4P29074 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.31□□□□□ -1.72
PTPN4P29074 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN4P29074 AL136964.1-201ENST00000622038 2990 ntBASIC4.31□□□□□ -1.72
PTPN4P29074 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPN4P29074 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.31□□□□□ -1.72
PTPN4P29074 AL356057.1-202ENST00000402263 756 ntBASIC4.31□□□□□ -1.72
PTPN4P29074 AP000357.1-201ENST00000409926 1165 ntBASIC4.31□□□□□ -1.72
PTPN4P29074 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPN4P29074 AC004975.1-201ENST00000428733 208 ntBASIC4.31□□□□□ -1.72
PTPN4P29074 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms