Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 BTBD10P2-201ENST00000404779 676 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 RPL5P18-201ENST00000406671 891 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 RNU2-6P-201ENST00000411404 190 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.33□□□□□ -1.4
NFKB1P19838 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 BNIP3P2-201ENST00000441221 577 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 POU5F1P5-201ENST00000445059 658 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.33□□□□□ -1.4
NFKB1P19838 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.33□□□□□ -1.4
NFKB1P19838 RPL38P4-201ENST00000502376 214 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.33□□□□□ -1.4
NFKB1P19838 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.33□□□□□ -1.4
NFKB1P19838 COX6B1P6-201ENST00000522347 255 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AC022861.1-201ENST00000522981 663 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AF279873.1-201ENST00000523393 313 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.33□□□□□ -1.4
NFKB1P19838 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.33□□□□□ -1.4
NFKB1P19838 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.33□□□□□ -1.4
NFKB1P19838 AL389895.1-201ENST00000554127 252 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.33□□□□□ -1.4
NFKB1P19838 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.33□□□□□ -1.4
NFKB1P19838 AC019322.1-201ENST00000571869 389 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.33□□□□□ -1.4
NFKB1P19838 AC022884.3-201ENST00000579571 248 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 MIR3167-201ENST00000579623 85 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 BX664608.1-201ENST00000610519 487 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AC015819.1-201ENST00000613588 663 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 AC005899.7-201ENST00000618199 588 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NFKB1P19838 RIOK3P1-201ENST00000418778 1528 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.33□□□□□ -1.4
NFKB1P19838 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NFKB1P19838 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NFKB1P19838 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NFKB1P19838 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NFKB1P19838 AC097504.1-201ENST00000515103 2415 ntBASIC6.33□□□□□ -1.4
NFKB1P19838 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.32□□□□□ -1.4
NFKB1P19838 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NFKB1P19838 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 LINC01613-201ENST00000561476 2780 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
NFKB1P19838 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.32□□□□□ -1.4
NFKB1P19838 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.32□□□□□ -1.4
NFKB1P19838 NACAP2-201ENST00000318548 624 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.32□□□□□ -1.4
NFKB1P19838 Y_RNA.133-201ENST00000363428 110 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 RN7SKP6-201ENST00000364795 319 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NFKB1P19838 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.32□□□□□ -1.4
NFKB1P19838 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 AL353777.1-201ENST00000425552 326 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.32□□□□□ -1.4
NFKB1P19838 Z82205.1-201ENST00000428456 297 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 RPS3AP38-201ENST00000435889 763 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 PPIAP10-201ENST00000438675 458 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.32□□□□□ -1.4
NFKB1P19838 GAPDHP23-201ENST00000444823 993 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.32□□□□□ -1.4
NFKB1P19838 GAPDHP14-201ENST00000450472 937 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AC112187.1-201ENST00000455837 479 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.32□□□□□ -1.4
NFKB1P19838 MTCO2P29-201ENST00000465212 189 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 RPL23AP12-201ENST00000467573 473 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 MTND6P8-201ENST00000503471 522 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 SNX18P24-201ENST00000505249 671 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 KLHL2P1-201ENST00000508691 521 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 KHDC1P1-201ENST00000511053 508 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 SNORA74.1-201ENST00000516320 180 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 Y_RNA.710-201ENST00000516975 110 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 RNU6-1314P-201ENST00000517139 104 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms