Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDGFRAP16234 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDGFRAP16234 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.59□□□□□ -1.68
PDGFRAP16234 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PDGFRAP16234 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
PDGFRAP16234 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDGFRAP16234 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFRAP16234 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFRAP16234 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFRAP16234 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFRAP16234 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFRAP16234 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 OR5P1P-201ENST00000299512 925 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 FAM3C2-201ENST00000312214 681 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 ENSAP3-201ENST00000312710 333 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
PDGFRAP16234 MIR1911-201ENST00000410783 80 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFRAP16234 AL592293.2-201ENST00000422292 996 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 MTCO2P1-201ENST00000424648 477 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFRAP16234 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFRAP16234 CBX1P1-201ENST00000440184 427 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFRAP16234 AC008379.1-201ENST00000463655 464 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 RPL35AP15-201ENST00000468042 339 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 AC011276.1-201ENST00000469688 323 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 RNU6-334P-201ENST00000517072 102 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFRAP16234 COX6B1P6-201ENST00000522347 255 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 C1DP5-201ENST00000525775 383 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 OR5BC1P-201ENST00000529327 739 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.58□□□□□ -1.68
PDGFRAP16234 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFRAP16234 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFRAP16234 AC090751.1-201ENST00000566966 267 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 MIR4512-201ENST00000583257 77 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFRAP16234 AC010680.3-201ENST00000604215 520 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
PDGFRAP16234 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.58□□□□□ -1.68
PDGFRAP16234 AC091979.2-201ENST00000607514 214 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 AL353600.1-201ENST00000608148 251 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFRAP16234 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFRAP16234 FP325313.1-201ENST00000638228 703 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 AC132825.7-201ENST00000638744 335 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFRAP16234 PNPT1P2-201ENST00000456768 2050 ntBASIC4.58□□□□□ -1.68
PDGFRAP16234 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFRAP16234 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PDGFRAP16234 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFRAP16234 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFRAP16234 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AC100871.1-201ENST00000507871 1456 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 AC027290.2-201ENST00000623210 18662 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 AC067945.1-201ENST00000342609 618 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 MIR331-201ENST00000362302 94 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 RNU4-25P-201ENST00000410569 230 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC092745.2-202ENST00000411880 369 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFRAP16234 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 AC234782.4-201ENST00000417646 1048 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC004690.1-201ENST00000418216 328 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFRAP16234 COX6CP17-201ENST00000421389 185 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 PDSS1P1-201ENST00000422953 1114 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 CHIAP3-201ENST00000423668 1133 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AC011998.1-201ENST00000433403 117 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFRAP16234 RPL7P33-201ENST00000444159 742 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AC133473.1-201ENST00000455173 299 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AL049829.1-201ENST00000465411 156 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC010683.1-201ENST00000473673 378 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC026979.1-201ENST00000492525 396 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AC008565.1-201ENST00000509046 885 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AL352979.3-201ENST00000553515 247 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFRAP16234 AP003117.1-201ENST00000602771 554 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC026741.1-201ENST00000605892 482 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC112503.2-201ENST00000609005 552 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AL445423.1-201ENST00000609941 536 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms