Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC116533.1-201ENST00000459748 321 ntBASIC4.45□□□□□ -1.7
KRT3P12035 RPS20P4-201ENST00000461659 355 ntBASIC4.45□□□□□ -1.7
KRT3P12035 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.45□□□□□ -1.7
KRT3P12035 RPS29P19-201ENST00000479709 171 ntBASIC4.45□□□□□ -1.7
KRT3P12035 RPL35P6-201ENST00000490024 372 ntBASIC4.45□□□□□ -1.7
KRT3P12035 RPS6P4-201ENST00000494693 758 ntBASIC4.45□□□□□ -1.7
KRT3P12035 AC111193.1-201ENST00000504097 155 ntBASIC4.45□□□□□ -1.7
KRT3P12035 AC112518.2-201ENST00000508565 425 ntBASIC4.45□□□□□ -1.7
KRT3P12035 VWA8P1-201ENST00000510889 176 ntBASIC4.45□□□□□ -1.7
KRT3P12035 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.45□□□□□ -1.7
KRT3P12035 RNA5SP519-201ENST00000516480 119 ntBASIC4.45□□□□□ -1.7
KRT3P12035 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRT3P12035 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.45□□□□□ -1.7
KRT3P12035 AC124068.1-201ENST00000563131 678 ntBASIC4.45□□□□□ -1.7
KRT3P12035 AC090079.2-201ENST00000575289 768 ntBASIC4.45□□□□□ -1.7
KRT3P12035 MIR4716-201ENST00000579628 84 ntBASIC4.45□□□□□ -1.7
KRT3P12035 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.45□□□□□ -1.7
KRT3P12035 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.45□□□□□ -1.7
KRT3P12035 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.45□□□□□ -1.7
KRT3P12035 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.45□□□□□ -1.7
KRT3P12035 AP001033.2-201ENST00000609701 1003 ntBASIC4.45□□□□□ -1.7
KRT3P12035 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRT3P12035 FAM27D1-201ENST00000612308 341 ntBASIC4.45□□□□□ -1.7
KRT3P12035 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.45□□□□□ -1.7
KRT3P12035 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.45□□□□□ -1.7
KRT3P12035 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.45□□□□□ -1.7
KRT3P12035 AL592437.2-201ENST00000421655 2434 ntBASIC4.45□□□□□ -1.7
KRT3P12035 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KRT3P12035 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT3P12035 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT3P12035 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT3P12035 OR4K17-201ENST00000315543 1032 ntBASIC4.44□□□□□ -1.7
KRT3P12035 RNU1-132P-201ENST00000364300 164 ntBASIC4.44□□□□□ -1.7
KRT3P12035 RNA5SP509-201ENST00000364577 119 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AL603766.1-201ENST00000407763 664 ntBASIC4.44□□□□□ -1.7
KRT3P12035 RNA5SP104-201ENST00000410989 118 ntBASIC4.44□□□□□ -1.7
KRT3P12035 RNU4-74P-201ENST00000411280 161 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC004552.1-201ENST00000419089 348 ntBASIC4.44□□□□□ -1.7
KRT3P12035 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT3P12035 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT3P12035 NPM1P24-201ENST00000428039 894 ntBASIC4.44□□□□□ -1.7
KRT3P12035 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT3P12035 AC097499.1-201ENST00000444277 208 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRT3P12035 RPL7P55-201ENST00000450522 746 ntBASIC4.44□□□□□ -1.7
KRT3P12035 NDUFS5P3-201ENST00000450668 321 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT3P12035 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT3P12035 RPS26P3-201ENST00000470205 348 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC090543.2-201ENST00000483963 348 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC004057.1-201ENST00000485827 348 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC104687.1-201ENST00000485829 412 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC083829.1-201ENST00000503756 657 ntBASIC4.44□□□□□ -1.7
KRT3P12035 OR51K1P-201ENST00000510214 950 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC008958.1-201ENST00000511047 682 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT3P12035 KCTD9P2-201ENST00000512203 1013 ntBASIC4.44□□□□□ -1.7
KRT3P12035 RNU6-334P-201ENST00000517072 102 ntBASIC4.44□□□□□ -1.7
KRT3P12035 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.44□□□□□ -1.7
KRT3P12035 IGKV2D-10-201ENST00000520194 281 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT3P12035 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT3P12035 AC092451.2-201ENST00000538746 658 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.44□□□□□ -1.7
KRT3P12035 AC079880.2-201ENST00000603790 1213 ntBASIC4.44□□□□□ -1.7
KRT3P12035 AC018618.2-201ENST00000604770 446 ntBASIC4.44□□□□□ -1.7
KRT3P12035 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT3P12035 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRT3P12035 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT3P12035 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT3P12035 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.44□□□□□ -1.7
KRT3P12035 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT3P12035 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT3P12035 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
KRT3P12035 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRT3P12035 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
KRT3P12035 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT3P12035 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.43□□□□□ -1.7
KRT3P12035 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 RNU6-252P-201ENST00000363232 107 ntBASIC4.43□□□□□ -1.7
KRT3P12035 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
KRT3P12035 RNU6-796P-201ENST00000391086 107 ntBASIC4.43□□□□□ -1.7
KRT3P12035 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.43□□□□□ -1.7
KRT3P12035 RNU4-27P-201ENST00000410889 139 ntBASIC4.43□□□□□ -1.7
KRT3P12035 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 AC009965.2-201ENST00000425328 970 ntBASIC4.43□□□□□ -1.7
KRT3P12035 RWDD4P2-201ENST00000426392 563 ntBASIC4.43□□□□□ -1.7
KRT3P12035 UBE2V1P6-201ENST00000430840 422 ntBASIC4.43□□□□□ -1.7
KRT3P12035 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.43□□□□□ -1.7
KRT3P12035 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT3P12035 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT3P12035 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.43□□□□□ -1.7
KRT3P12035 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms