Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FAM228BP0C875 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
FAM228BP0C875 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.99□□□□□ -1.77
FAM228BP0C875 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FAM228BP0C875 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
FAM228BP0C875 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.99□□□□□ -1.77
FAM228BP0C875 MIR423-201ENST00000362201 94 ntBASIC3.99□□□□□ -1.77
FAM228BP0C875 AC114814.2-201ENST00000419195 485 ntBASIC3.99□□□□□ -1.77
FAM228BP0C875 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.99□□□□□ -1.77
FAM228BP0C875 HMGB3P10-201ENST00000434734 572 ntBASIC3.99□□□□□ -1.77
FAM228BP0C875 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.99□□□□□ -1.77
FAM228BP0C875 AC006480.1-201ENST00000449887 378 ntBASIC3.99□□□□□ -1.77
FAM228BP0C875 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.99□□□□□ -1.77
FAM228BP0C875 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.99□□□□□ -1.77
FAM228BP0C875 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.99□□□□□ -1.77
FAM228BP0C875 S100A11P1-201ENST00000477525 312 ntBASIC3.99□□□□□ -1.77
FAM228BP0C875 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
FAM228BP0C875 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FAM228BP0C875 AC108064.1-201ENST00000513791 460 ntBASIC3.99□□□□□ -1.77
FAM228BP0C875 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.99□□□□□ -1.77
FAM228BP0C875 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.99□□□□□ -1.77
FAM228BP0C875 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FAM228BP0C875 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
FAM228BP0C875 AC006960.3-201ENST00000561845 705 ntBASIC3.99□□□□□ -1.77
FAM228BP0C875 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.99□□□□□ -1.77
FAM228BP0C875 KLKP1-201ENST00000595979 403 ntBASIC3.99□□□□□ -1.77
FAM228BP0C875 AC244505.7-201ENST00000599675 272 ntBASIC3.99□□□□□ -1.77
FAM228BP0C875 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.99□□□□□ -1.77
FAM228BP0C875 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.99□□□□□ -1.77
FAM228BP0C875 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.99□□□□□ -1.77
FAM228BP0C875 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.99□□□□□ -1.77
FAM228BP0C875 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
FAM228BP0C875 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
FAM228BP0C875 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FAM228BP0C875 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
FAM228BP0C875 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 MIR372-201ENST00000362225 67 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 SNORA70C-201ENST00000384538 135 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 RNU6-1263P-201ENST00000384601 106 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 RNA5SP424-201ENST00000390988 115 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 RPS26P47-201ENST00000427219 348 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.98□□□□□ -1.77
FAM228BP0C875 MTCO1P51-201ENST00000427672 1060 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 RPS26P40-201ENST00000435209 294 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 AC099063.2-201ENST00000446360 662 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 AL162151.2-201ENST00000448875 158 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 NANOGP10-201ENST00000453325 895 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 UBDP1-202ENST00000457888 382 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.98□□□□□ -1.77
FAM228BP0C875 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.98□□□□□ -1.77
FAM228BP0C875 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.98□□□□□ -1.77
FAM228BP0C875 RN7SKP122-201ENST00000515923 296 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.98□□□□□ -1.77
FAM228BP0C875 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.98□□□□□ -1.77
FAM228BP0C875 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.98□□□□□ -1.77
FAM228BP0C875 OR5AP1P-201ENST00000529730 940 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 AC008011.1-201ENST00000545989 227 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.98□□□□□ -1.77
FAM228BP0C875 AL109741.3-201ENST00000561748 592 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 AGGF1P8-201ENST00000562979 1000 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 AL023583.1-201ENST00000607518 1143 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 OR6R2P-201ENST00000609216 300 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 MIR6758-201ENST00000620653 63 ntBASIC3.98□□□□□ -1.77
FAM228BP0C875 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.98□□□□□ -1.77
FAM228BP0C875 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
FAM228BP0C875 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
FAM228BP0C875 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.97□□□□□ -1.77
FAM228BP0C875 FAM91A3P-201ENST00000456826 2544 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.97□□□□□ -1.77
FAM228BP0C875 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
FAM228BP0C875 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.97□□□□□ -1.77
FAM228BP0C875 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FAM228BP0C875 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FAM228BP0C875 RNU1-13P-201ENST00000384499 162 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 Z98941.1-201ENST00000407764 100 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 AL807761.1-201ENST00000417622 171 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FAM228BP0C875 OR6K4P-201ENST00000423179 955 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FAM228BP0C875 AL365396.1-201ENST00000430854 671 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 AL353597.2-202ENST00000434901 373 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 AL645931.1-201ENST00000439737 410 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 AC009263.1-201ENST00000441193 1239 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 AC006326.1-201ENST00000445465 787 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 RPS29P31-201ENST00000446147 164 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.97□□□□□ -1.77
FAM228BP0C875 AC005229.2-201ENST00000456995 399 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 OR9M1P-201ENST00000459641 921 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 NIPA2P2-201ENST00000496376 1083 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 RNA5SP164-201ENST00000516533 110 ntBASIC3.97□□□□□ -1.77
FAM228BP0C875 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms