Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SFTPBP07988 U6.112-201ENST00000384129 70 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 SNORA51.12-201ENST00000384448 134 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 GLULP6-201ENST00000399502 913 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 MIR921-201ENST00000401133 56 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 DNAJC19P6-201ENST00000401853 280 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.97□□□□□ -1.77
SFTPBP07988 RN7SKP100-201ENST00000411258 284 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 VDAC1P9-201ENST00000412766 841 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.97□□□□□ -1.77
SFTPBP07988 AC241520.1-201ENST00000422654 1099 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.97□□□□□ -1.77
SFTPBP07988 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.97□□□□□ -1.77
SFTPBP07988 YWHAZP8-201ENST00000436935 731 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 BX248409.1-201ENST00000455497 255 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 RPS5P7-201ENST00000456664 608 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 RPS29P33-201ENST00000456717 146 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AC090142.1-201ENST00000465776 462 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 FTH1P2-201ENST00000466086 412 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.97□□□□□ -1.77
SFTPBP07988 AC025164.1-201ENST00000496249 478 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.97□□□□□ -1.77
SFTPBP07988 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.97□□□□□ -1.77
SFTPBP07988 RN7SKP82-201ENST00000516786 223 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 RN7SKP96-201ENST00000516948 297 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.97□□□□□ -1.77
SFTPBP07988 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.97□□□□□ -1.77
SFTPBP07988 HMGB1P1-201ENST00000522557 636 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 IGJP1-201ENST00000522682 475 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AF279873.1-201ENST00000523393 313 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.97□□□□□ -1.77
SFTPBP07988 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.97□□□□□ -1.77
SFTPBP07988 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.97□□□□□ -1.77
SFTPBP07988 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.97□□□□□ -1.77
SFTPBP07988 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.97□□□□□ -1.77
SFTPBP07988 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.97□□□□□ -1.77
SFTPBP07988 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.97□□□□□ -1.77
SFTPBP07988 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.97□□□□□ -1.77
SFTPBP07988 HMGB2P1-201ENST00000591146 634 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AC008687.2-201ENST00000597865 520 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AC010680.3-201ENST00000604215 520 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SFTPBP07988 MIR6864-201ENST00000617935 70 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AL023881.1-201ENST00000621088 301 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AP000943.4-201ENST00000622912 357 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.97□□□□□ -1.77
SFTPBP07988 AL109659.3-201ENST00000624985 950 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.97□□□□□ -1.77
SFTPBP07988 MTND4P8-201ENST00000514997 1362 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.97□□□□□ -1.77
SFTPBP07988 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.97□□□□□ -1.77
SFTPBP07988 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SFTPBP07988 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SFTPBP07988 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.97□□□□□ -1.77
SFTPBP07988 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SFTPBP07988 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SFTPBP07988 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.96□□□□□ -1.77
SFTPBP07988 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
SFTPBP07988 AC010928.1-201ENST00000592477 1447 ntBASIC3.96□□□□□ -1.77
SFTPBP07988 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SFTPBP07988 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SFTPBP07988 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.96□□□□□ -1.78
SFTPBP07988 AL356489.2-201ENST00000566968 3528 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SFTPBP07988 RNU6-207P-201ENST00000384137 107 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 MIR708-201ENST00000390708 88 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 HMGB3P19-201ENST00000403971 560 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 RPS16P5-201ENST00000406501 404 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.96□□□□□ -1.78
SFTPBP07988 RNU6-272P-201ENST00000411028 104 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 AL591848.1-201ENST00000413092 322 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 AL590139.1-201ENST00000416267 400 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 RPS12P23-201ENST00000419579 400 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 GAPDHP49-201ENST00000421421 961 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.96□□□□□ -1.78
SFTPBP07988 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.96□□□□□ -1.78
SFTPBP07988 DNAJC19P7-201ENST00000428811 344 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 NRBF2P3-201ENST00000432731 865 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 RPL21P110-201ENST00000433345 446 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.96□□□□□ -1.78
SFTPBP07988 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.96□□□□□ -1.78
SFTPBP07988 RPL36AP15-201ENST00000444514 266 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 OR51B8P-201ENST00000449892 769 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 NDUFS5P3-201ENST00000450668 321 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.96□□□□□ -1.78
SFTPBP07988 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SFTPBP07988 NDUFA12P1-201ENST00000455914 406 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 ZFRP1-201ENST00000457579 2970 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.96□□□□□ -1.78
SFTPBP07988 RPL5P30-201ENST00000465511 891 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 AC006967.1-201ENST00000467608 589 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SFTPBP07988 RPS27P23-201ENST00000487608 251 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 SCARNA22-201ENST00000503991 125 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.96□□□□□ -1.78
SFTPBP07988 AC005351.1-201ENST00000511152 786 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.96□□□□□ -1.78
SFTPBP07988 NDUFB4P12-201ENST00000513465 390 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 PRELID3BP4-201ENST00000515476 571 ntBASIC3.96□□□□□ -1.78
SFTPBP07988 RNU6-416P-201ENST00000516265 103 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms