Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.46□□□□□ -1.86
CD74P04233 MIR331-201ENST00000362302 94 ntBASIC3.46□□□□□ -1.86
CD74P04233 SNORD113.2-201ENST00000364166 89 ntBASIC3.46□□□□□ -1.86
CD74P04233 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CD74P04233 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.46□□□□□ -1.86
CD74P04233 RNU6-532P-201ENST00000384318 107 ntBASIC3.46□□□□□ -1.86
CD74P04233 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CD74P04233 MIR298-201ENST00000401212 88 ntBASIC3.46□□□□□ -1.86
CD74P04233 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.46□□□□□ -1.86
CD74P04233 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.46□□□□□ -1.86
CD74P04233 CHIAP3-201ENST00000423668 1133 ntBASIC3.46□□□□□ -1.86
CD74P04233 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.46□□□□□ -1.86
CD74P04233 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.46□□□□□ -1.86
CD74P04233 CEACAMP9-201ENST00000442990 513 ntBASIC3.46□□□□□ -1.86
CD74P04233 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.46□□□□□ -1.86
CD74P04233 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.46□□□□□ -1.86
CD74P04233 AC006511.1-201ENST00000470614 315 ntBASIC3.46□□□□□ -1.86
CD74P04233 RN7SL860P-201ENST00000473738 223 ntBASIC3.46□□□□□ -1.86
CD74P04233 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.46□□□□□ -1.86
CD74P04233 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CD74P04233 HMGB1P21-201ENST00000502313 581 ntBASIC3.46□□□□□ -1.86
CD74P04233 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.46□□□□□ -1.86
CD74P04233 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.46□□□□□ -1.86
CD74P04233 SNORA70.14-201ENST00000516205 110 ntBASIC3.46□□□□□ -1.86
CD74P04233 RNU7-143P-201ENST00000516781 65 ntBASIC3.46□□□□□ -1.86
CD74P04233 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.46□□□□□ -1.86
CD74P04233 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.46□□□□□ -1.86
CD74P04233 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.46□□□□□ -1.86
CD74P04233 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.46□□□□□ -1.86
CD74P04233 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.46□□□□□ -1.86
CD74P04233 AC069061.3-201ENST00000582254 823 ntBASIC3.46□□□□□ -1.86
CD74P04233 NF1P5-201ENST00000588287 448 ntBASIC3.46□□□□□ -1.86
CD74P04233 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.46□□□□□ -1.86
CD74P04233 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.46□□□□□ -1.86
CD74P04233 EIF1P6-201ENST00000600054 334 ntBASIC3.46□□□□□ -1.86
CD74P04233 AL355816.1-201ENST00000607951 118 ntBASIC3.46□□□□□ -1.86
CD74P04233 MIR6780A-201ENST00000615089 68 ntBASIC3.46□□□□□ -1.86
CD74P04233 AL445363.3-201ENST00000623080 671 ntBASIC3.46□□□□□ -1.86
CD74P04233 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.46□□□□□ -1.86
CD74P04233 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.46□□□□□ -1.86
CD74P04233 AC140479.6-201ENST00000633535 357 ntBASIC3.46□□□□□ -1.86
CD74P04233 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.46□□□□□ -1.86
CD74P04233 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CD74P04233 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
CD74P04233 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CD74P04233 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CD74P04233 RNF6P1-201ENST00000444889 1784 ntBASIC3.46□□□□□ -1.86
CD74P04233 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CD74P04233 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CD74P04233 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CD74P04233 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CD74P04233 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CD74P04233 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.45□□□□□ -1.86
CD74P04233 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CD74P04233 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CD74P04233 SNORA70F-201ENST00000384142 135 ntBASIC3.45□□□□□ -1.86
CD74P04233 MIR7-1-201ENST00000384871 110 ntBASIC3.45□□□□□ -1.86
CD74P04233 RN7SKP106-201ENST00000410832 272 ntBASIC3.45□□□□□ -1.86
CD74P04233 TMSB10P2-201ENST00000416049 131 ntBASIC3.45□□□□□ -1.86
CD74P04233 UQCRBP1-201ENST00000421129 336 ntBASIC3.45□□□□□ -1.86
CD74P04233 AC092832.1-201ENST00000422934 400 ntBASIC3.45□□□□□ -1.86
CD74P04233 RNF19BPX-201ENST00000426224 625 ntBASIC3.45□□□□□ -1.86
CD74P04233 AL732292.1-201ENST00000426692 226 ntBASIC3.45□□□□□ -1.86
CD74P04233 NPM1P34-201ENST00000428821 893 ntBASIC3.45□□□□□ -1.86
CD74P04233 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CD74P04233 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.45□□□□□ -1.86
CD74P04233 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.45□□□□□ -1.86
CD74P04233 RPL36AP15-201ENST00000444514 266 ntBASIC3.45□□□□□ -1.86
CD74P04233 VN1R48P-201ENST00000448149 1036 ntBASIC3.45□□□□□ -1.86
CD74P04233 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.45□□□□□ -1.86
CD74P04233 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.45□□□□□ -1.86
CD74P04233 AC010307.1-201ENST00000467206 836 ntBASIC3.45□□□□□ -1.86
CD74P04233 RN7SL738P-201ENST00000470264 297 ntBASIC3.45□□□□□ -1.86
CD74P04233 CEACAMP10-202ENST00000495431 496 ntBASIC3.45□□□□□ -1.86
CD74P04233 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.45□□□□□ -1.86
CD74P04233 PCNAP1-201ENST00000505363 709 ntBASIC3.45□□□□□ -1.86
CD74P04233 AC026726.1-201ENST00000512859 601 ntBASIC3.45□□□□□ -1.86
CD74P04233 SNORA48.9-201ENST00000516419 162 ntBASIC3.45□□□□□ -1.86
CD74P04233 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.45□□□□□ -1.86
CD74P04233 OR7E10P-201ENST00000526420 991 ntBASIC3.45□□□□□ -1.86
CD74P04233 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.45□□□□□ -1.86
CD74P04233 AL133457.1-201ENST00000564251 987 ntBASIC3.45□□□□□ -1.86
CD74P04233 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.45□□□□□ -1.86
CD74P04233 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.45□□□□□ -1.86
CD74P04233 AC008782.1-201ENST00000603386 430 ntBASIC3.45□□□□□ -1.86
CD74P04233 Z82195.1-201ENST00000604558 398 ntBASIC3.45□□□□□ -1.86
CD74P04233 AC113403.1-201ENST00000604910 193 ntBASIC3.45□□□□□ -1.86
CD74P04233 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.45□□□□□ -1.86
CD74P04233 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.45□□□□□ -1.86
CD74P04233 AC023043.4-201ENST00000612081 449 ntBASIC3.45□□□□□ -1.86
CD74P04233 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.45□□□□□ -1.86
CD74P04233 AP005019.3-201ENST00000620418 560 ntBASIC3.45□□□□□ -1.86
CD74P04233 AP003072.4-201ENST00000624580 310 ntBASIC3.45□□□□□ -1.86
CD74P04233 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.45□□□□□ -1.86
CD74P04233 MFSD8-216ENST00000641147 4009 ntBASIC3.45□□□□□ -1.86
CD74P04233 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CD74P04233 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CD74P04233 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CD74P04233 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CD74P04233 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms