Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ATP6V1G1P6-201ENST00000504007 334 ntBASIC2.25□□□□□ -2.05
APOBP04114 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC2.25□□□□□ -2.05
APOBP04114 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC2.25□□□□□ -2.05
APOBP04114 RNA5SP164-201ENST00000516533 110 ntBASIC2.25□□□□□ -2.05
APOBP04114 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.25□□□□□ -2.05
APOBP04114 SNORD91B-202ENST00000608459 222 ntBASIC2.25□□□□□ -2.05
APOBP04114 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.25□□□□□ -2.05
APOBP04114 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
APOBP04114 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
APOBP04114 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
APOBP04114 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
APOBP04114 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC2.25□□□□□ -2.05
APOBP04114 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.25□□□□□ -2.05
APOBP04114 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC2.25□□□□□ -2.05
APOBP04114 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC2.25□□□□□ -2.05
APOBP04114 AP000553.6-201ENST00000641242 118 ntBASIC2.25□□□□□ -2.05
APOBP04114 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.25□□□□□ -2.05
APOBP04114 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.25□□□□□ -2.05
APOBP04114 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
APOBP04114 AC118273.1-201ENST00000525324 3006 ntBASIC2.24□□□□□ -2.05
APOBP04114 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.24□□□□□ -2.05
APOBP04114 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
APOBP04114 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
APOBP04114 RNA5SP424-201ENST00000390988 115 ntBASIC2.24□□□□□ -2.05
APOBP04114 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
APOBP04114 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 AL031584.1-201ENST00000447169 754 ntBASIC2.24□□□□□ -2.05
APOBP04114 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.24□□□□□ -2.05
APOBP04114 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 AL163642.2-201ENST00000604722 1019 ntBASIC2.24□□□□□ -2.05
APOBP04114 SNORA62.6-201ENST00000606322 83 ntBASIC2.24□□□□□ -2.05
APOBP04114 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
APOBP04114 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
APOBP04114 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
APOBP04114 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
APOBP04114 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC2.24□□□□□ -2.05
APOBP04114 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 DEFB109F-201ENST00000491870 277 ntBASIC2.24□□□□□ -2.05
APOBP04114 Y_RNA.673-201ENST00000516306 88 ntBASIC2.24□□□□□ -2.05
APOBP04114 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.24□□□□□ -2.05
APOBP04114 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
APOBP04114 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 DNAJC19P8-201ENST00000452887 259 ntBASIC2.24□□□□□ -2.05
APOBP04114 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 AC007066.2-202ENST00000566531 914 ntBASIC2.24□□□□□ -2.05
APOBP04114 AC106734.1-201ENST00000568646 663 ntBASIC2.24□□□□□ -2.05
APOBP04114 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
APOBP04114 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.24□□□□□ -2.05
APOBP04114 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
APOBP04114 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.24□□□□□ -2.05
APOBP04114 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
APOBP04114 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
APOBP04114 BX842559.1-201ENST00000419615 532 ntBASIC2.24□□□□□ -2.05
APOBP04114 AL353705.1-201ENST00000433468 480 ntBASIC2.24□□□□□ -2.05
APOBP04114 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 AC023141.12-201ENST00000512399 199 ntBASIC2.24□□□□□ -2.05
APOBP04114 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.24□□□□□ -2.05
APOBP04114 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC2.24□□□□□ -2.05
APOBP04114 SLC25A36P1-201ENST00000590111 465 ntBASIC2.24□□□□□ -2.05
APOBP04114 AL732618.1-201ENST00000623251 301 ntBASIC2.24□□□□□ -2.05
APOBP04114 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC2.23□□□□□ -2.05
APOBP04114 AL645937.1-201ENST00000641739 1652 ntBASIC2.23□□□□□ -2.05
APOBP04114 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.23□□□□□ -2.05
APOBP04114 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.23□□□□□ -2.05
APOBP04114 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
APOBP04114 AL121890.1-201ENST00000435457 205 ntBASIC2.23□□□□□ -2.05
APOBP04114 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC2.23□□□□□ -2.05
APOBP04114 AC005008.1-201ENST00000456151 612 ntBASIC2.23□□□□□ -2.05
APOBP04114 RPL7P48-201ENST00000461513 746 ntBASIC2.23□□□□□ -2.05
APOBP04114 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.23□□□□□ -2.05
APOBP04114 AL353600.1-201ENST00000608148 251 ntBASIC2.23□□□□□ -2.05
APOBP04114 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
APOBP04114 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC2.23□□□□□ -2.05
APOBP04114 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
APOBP04114 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms