Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 EIF4A1P11-201ENST00000451239 222 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 HMGB3P22-202ENST00000451823 572 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 SNORD105B-201ENST00000458770 79 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 U3.44-201ENST00000458938 192 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 RPL21P10-201ENST00000463521 490 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 AGGF1P3-201ENST00000493675 1213 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 STMN1P2-201ENST00000508435 439 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 RNU2-27P-201ENST00000516185 142 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 AP006245.1-201ENST00000522549 120 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 AC008638.3-201ENST00000603341 463 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A1P02462 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.39□□□□□ -1.71
COL4A1P02462 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A1P02462 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A1P02462 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL4A1P02462 NAMPTP1-201ENST00000440465 2514 ntBASIC4.39□□□□□ -1.71
COL4A1P02462 FRG1CP-201ENST00000358464 769 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A1P02462 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A1P02462 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A1P02462 AL035458.1-201ENST00000433096 585 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.38□□□□□ -1.71
COL4A1P02462 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A1P02462 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.38□□□□□ -1.71
COL4A1P02462 RPL21P6-201ENST00000479171 504 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 RPL21P13-201ENST00000488305 481 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A1P02462 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A1P02462 AC103968.1-201ENST00000557841 573 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 MIR5186-201ENST00000577504 120 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A1P02462 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A1P02462 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.38□□□□□ -1.71
COL4A1P02462 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
COL4A1P02462 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A1P02462 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
COL4A1P02462 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A1P02462 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A1P02462 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A1P02462 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A1P02462 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A1P02462 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A1P02462 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.38□□□□□ -1.71
COL4A1P02462 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL4A1P02462 AC007685.1-201ENST00000329806 452 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 RNA5SP50-201ENST00000363731 107 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 SNORA48.2-201ENST00000390926 124 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.38□□□□□ -1.71
COL4A1P02462 AC096644.3-201ENST00000416788 338 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 MOB1AP1-201ENST00000430903 535 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 AC091862.1-201ENST00000438016 1100 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 AC006480.1-201ENST00000449887 378 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 AC084357.1-201ENST00000473404 255 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.38□□□□□ -1.71
COL4A1P02462 SUMO2P20-201ENST00000520803 283 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 AL137843.1-201ENST00000605078 385 ntBASIC4.38□□□□□ -1.71
COL4A1P02462 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.38□□□□□ -1.71
COL4A1P02462 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A1P02462 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
COL4A1P02462 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A1P02462 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
COL4A1P02462 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A1P02462 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A1P02462 HSFY1P1-201ENST00000423928 1178 ntBASIC4.37□□□□□ -1.71
COL4A1P02462 AC005019.1-201ENST00000436455 431 ntBASIC4.37□□□□□ -1.71
COL4A1P02462 PHBP14-201ENST00000512887 367 ntBASIC4.37□□□□□ -1.71
COL4A1P02462 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.37□□□□□ -1.71
COL4A1P02462 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.37□□□□□ -1.71
COL4A1P02462 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.37□□□□□ -1.71
COL4A1P02462 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.37□□□□□ -1.71
COL4A1P02462 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.37□□□□□ -1.71
COL4A1P02462 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.37□□□□□ -1.71
COL4A1P02462 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.37□□□□□ -1.71
COL4A1P02462 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A1P02462 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A1P02462 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.37□□□□□ -1.71
COL4A1P02462 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A1P02462 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.37□□□□□ -1.71
COL4A1P02462 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
COL4A1P02462 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL4A1P02462 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
COL4A1P02462 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.37□□□□□ -1.71
COL4A1P02462 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL4A1P02462 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A1P02462 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
COL4A1P02462 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A1P02462 AC097504.1-201ENST00000515103 2415 ntBASIC4.36□□□□□ -1.71
COL4A1P02462 HLFP1-201ENST00000402375 499 ntBASIC4.36□□□□□ -1.71
COL4A1P02462 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.36□□□□□ -1.71
COL4A1P02462 AL353748.1-201ENST00000440753 474 ntBASIC4.36□□□□□ -1.71
COL4A1P02462 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.36□□□□□ -1.71
COL4A1P02462 FTH1P24-201ENST00000503502 462 ntBASIC4.36□□□□□ -1.71
COL4A1P02462 AC016550.3-201ENST00000515706 767 ntBASIC4.36□□□□□ -1.71
COL4A1P02462 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.36□□□□□ -1.71
COL4A1P02462 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A1P02462 AC125494.3-201ENST00000602759 455 ntBASIC4.36□□□□□ -1.71
COL4A1P02462 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A1P02462 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL4A1P02462 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.36□□□□□ -1.71
COL4A1P02462 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms