Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR7-3-201ENST00000384898 110 ntBASIC3.7□□□□□ -1.82
TNFP01375 AL590609.2-201ENST00000421430 368 ntBASIC3.7□□□□□ -1.82
TNFP01375 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.7□□□□□ -1.82
TNFP01375 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.7□□□□□ -1.82
TNFP01375 AC133473.1-201ENST00000455173 299 ntBASIC3.7□□□□□ -1.82
TNFP01375 RPL7L1P8-201ENST00000469911 741 ntBASIC3.7□□□□□ -1.82
TNFP01375 AC022034.3-201ENST00000471393 478 ntBASIC3.7□□□□□ -1.82
TNFP01375 AC025445.1-201ENST00000502728 300 ntBASIC3.7□□□□□ -1.82
TNFP01375 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 RN7SKP18-201ENST00000516005 275 ntBASIC3.7□□□□□ -1.82
TNFP01375 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.7□□□□□ -1.82
TNFP01375 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.7□□□□□ -1.82
TNFP01375 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
TNFP01375 MRPS35P3-201ENST00000603189 709 ntBASIC3.7□□□□□ -1.82
TNFP01375 BMS1P21-201ENST00000634565 365 ntBASIC3.7□□□□□ -1.82
TNFP01375 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 UBE3AP2-201ENST00000429033 2259 ntBASIC3.7□□□□□ -1.82
TNFP01375 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFP01375 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TNFP01375 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
TNFP01375 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TNFP01375 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFP01375 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFP01375 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
TNFP01375 CASC19-284ENST00000642142 1868 ntBASIC3.69□□□□□ -1.82
TNFP01375 LINC00561-201ENST00000565815 2738 ntBASIC3.69□□□□□ -1.82
TNFP01375 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFP01375 SNORA71.3-201ENST00000362582 128 ntBASIC3.69□□□□□ -1.82
TNFP01375 MIR513A2-201ENST00000385249 127 ntBASIC3.69□□□□□ -1.82
TNFP01375 AC007066.1-201ENST00000392902 381 ntBASIC3.69□□□□□ -1.82
TNFP01375 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFP01375 YME1L1P1-201ENST00000429435 297 ntBASIC3.69□□□□□ -1.82
TNFP01375 AC091286.1-201ENST00000431233 461 ntBASIC3.69□□□□□ -1.82
TNFP01375 TPTE2P3-201ENST00000441562 1189 ntBASIC3.69□□□□□ -1.82
TNFP01375 PDSS1P2-201ENST00000449397 678 ntBASIC3.69□□□□□ -1.82
TNFP01375 AC006480.1-201ENST00000449887 378 ntBASIC3.69□□□□□ -1.82
TNFP01375 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.69□□□□□ -1.82
TNFP01375 AL121877.1-201ENST00000453704 622 ntBASIC3.69□□□□□ -1.82
TNFP01375 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFP01375 UBDP1-202ENST00000457888 382 ntBASIC3.69□□□□□ -1.82
TNFP01375 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TNFP01375 AC006499.5-201ENST00000505037 514 ntBASIC3.69□□□□□ -1.82
TNFP01375 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.69□□□□□ -1.82
TNFP01375 AC008802.1-201ENST00000519121 791 ntBASIC3.69□□□□□ -1.82
TNFP01375 OR8I1P-201ENST00000529291 931 ntBASIC3.69□□□□□ -1.82
TNFP01375 DEFB109D-201ENST00000529497 240 ntBASIC3.69□□□□□ -1.82
TNFP01375 AC069240.1-201ENST00000548774 375 ntBASIC3.69□□□□□ -1.82
TNFP01375 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.69□□□□□ -1.82
TNFP01375 SNORA62.6-201ENST00000606322 83 ntBASIC3.69□□□□□ -1.82
TNFP01375 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.69□□□□□ -1.82
TNFP01375 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.69□□□□□ -1.82
TNFP01375 AC009093.8-201ENST00000641769 292 ntBASIC3.69□□□□□ -1.82
TNFP01375 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TNFP01375 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TNFP01375 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.68□□□□□ -1.82
TNFP01375 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
TNFP01375 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFP01375 AC007685.1-201ENST00000329806 452 ntBASIC3.68□□□□□ -1.82
TNFP01375 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
TNFP01375 RNA5SP119-201ENST00000362715 117 ntBASIC3.68□□□□□ -1.82
TNFP01375 MIR708-201ENST00000390708 88 ntBASIC3.68□□□□□ -1.82
TNFP01375 RNU2-65P-201ENST00000410162 185 ntBASIC3.68□□□□□ -1.82
TNFP01375 RNA5SP104-201ENST00000410989 118 ntBASIC3.68□□□□□ -1.82
TNFP01375 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFP01375 AC087650.1-201ENST00000431445 468 ntBASIC3.68□□□□□ -1.82
TNFP01375 HSPD1P21-201ENST00000436541 245 ntBASIC3.68□□□□□ -1.82
TNFP01375 SNORA71B-202ENST00000439232 272 ntBASIC3.68□□□□□ -1.82
TNFP01375 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFP01375 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFP01375 RPS3AP46-201ENST00000448352 682 ntBASIC3.68□□□□□ -1.82
TNFP01375 AL451050.1-201ENST00000450126 415 ntBASIC3.68□□□□□ -1.82
TNFP01375 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFP01375 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.68□□□□□ -1.82
TNFP01375 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFP01375 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.68□□□□□ -1.82
TNFP01375 AC022336.1-201ENST00000475510 337 ntBASIC3.68□□□□□ -1.82
TNFP01375 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.68□□□□□ -1.82
TNFP01375 AC104619.4-201ENST00000510773 249 ntBASIC3.68□□□□□ -1.82
TNFP01375 RAC1P2-201ENST00000511164 579 ntBASIC3.68□□□□□ -1.82
TNFP01375 RNA5SP154-201ENST00000516193 111 ntBASIC3.68□□□□□ -1.82
TNFP01375 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFP01375 DUXAP2-201ENST00000519198 589 ntBASIC3.68□□□□□ -1.82
TNFP01375 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.68□□□□□ -1.82
TNFP01375 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFP01375 MIR3944-201ENST00000581277 108 ntBASIC3.68□□□□□ -1.82
TNFP01375 RNU1-30P-201ENST00000606575 163 ntBASIC3.68□□□□□ -1.82
TNFP01375 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.68□□□□□ -1.82
TNFP01375 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFP01375 AL391261.4-201ENST00000616012 481 ntBASIC3.68□□□□□ -1.82
TNFP01375 AC244100.1-202ENST00000621554 382 ntBASIC3.68□□□□□ -1.82
TNFP01375 AP003400.2-201ENST00000624036 666 ntBASIC3.68□□□□□ -1.82
TNFP01375 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFP01375 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFP01375 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.68□□□□□ -1.82
TNFP01375 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms