Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.89□□□□□ -1.79
SEMA3DO95025 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.89□□□□□ -1.79
SEMA3DO95025 ANP32BP2-201ENST00000454525 545 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AC018635.1-201ENST00000468292 1030 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.89□□□□□ -1.79
SEMA3DO95025 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.89□□□□□ -1.79
SEMA3DO95025 KRT19P6-201ENST00000510983 209 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.89□□□□□ -1.79
SEMA3DO95025 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AC022968.1-201ENST00000567372 442 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.89□□□□□ -1.79
SEMA3DO95025 MIR3138-201ENST00000585238 82 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.89□□□□□ -1.79
SEMA3DO95025 AL451044.1-201ENST00000604867 238 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AC128687.2-201ENST00000609657 566 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AL445567.2-201ENST00000618935 498 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AC105105.5-201ENST00000622635 1294 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 AC010608.2-201ENST00000624830 470 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.89□□□□□ -1.79
SEMA3DO95025 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.89□□□□□ -1.79
SEMA3DO95025 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.89□□□□□ -1.79
SEMA3DO95025 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SEMA3DO95025 AC007342.7-201ENST00000624610 2337 ntBASIC3.89□□□□□ -1.79
SEMA3DO95025 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SEMA3DO95025 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SEMA3DO95025 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
SEMA3DO95025 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.88□□□□□ -1.79
SEMA3DO95025 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.88□□□□□ -1.79
SEMA3DO95025 OTUD4P1-201ENST00000237841 3067 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.88□□□□□ -1.79
SEMA3DO95025 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SEMA3DO95025 SNORD6-201ENST00000365444 73 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.88□□□□□ -1.79
SEMA3DO95025 MIR1251-201ENST00000408552 70 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.88□□□□□ -1.79
SEMA3DO95025 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.88□□□□□ -1.79
SEMA3DO95025 RPA2P2-201ENST00000419698 796 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 PTP4A1P5-201ENST00000420305 455 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 VDAC1P6-201ENST00000430062 855 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.88□□□□□ -1.79
SEMA3DO95025 AL358472.1-201ENST00000431295 329 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.88□□□□□ -1.79
SEMA3DO95025 TPTE2P3-201ENST00000441562 1189 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.88□□□□□ -1.79
SEMA3DO95025 AC006463.2-201ENST00000473326 348 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 AC105137.1-201ENST00000484355 562 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.88□□□□□ -1.79
SEMA3DO95025 RNU6-319P-201ENST00000516025 108 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 TRAV11-201ENST00000539512 339 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 AL049874.4-201ENST00000557593 255 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.88□□□□□ -1.79
SEMA3DO95025 AC025627.2-201ENST00000576220 160 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 AC115621.1-201ENST00000604653 858 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.88□□□□□ -1.79
SEMA3DO95025 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.88□□□□□ -1.79
SEMA3DO95025 AL773545.4-201ENST00000637262 310 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SEMA3DO95025 AL513478.4-201ENST00000641636 310 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SEMA3DO95025 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.88□□□□□ -1.79
SEMA3DO95025 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.88□□□□□ -1.79
SEMA3DO95025 MTND4P10-201ENST00000446199 1363 ntBASIC3.88□□□□□ -1.79
SEMA3DO95025 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEMA3DO95025 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.87□□□□□ -1.79
SEMA3DO95025 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SEMA3DO95025 SNORD35B-201ENST00000363660 87 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 RNU6-891P-201ENST00000384280 111 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 AC136624.1-201ENST00000400791 413 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.87□□□□□ -1.79
SEMA3DO95025 CHIAP3-201ENST00000423668 1133 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 MTCO3P21-201ENST00000430791 643 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 MRPL50P1-201ENST00000431951 384 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 AC073143.1-201ENST00000436316 395 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.87□□□□□ -1.79
SEMA3DO95025 RPL7AP52-201ENST00000458096 790 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 AC092691.2-201ENST00000461787 803 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 LARP7P4-201ENST00000481075 878 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 RPL31P61-201ENST00000496160 376 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 AC010627.1-201ENST00000503819 1294 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.87□□□□□ -1.79
SEMA3DO95025 IGBP1P5-201ENST00000507524 1000 ntBASIC3.87□□□□□ -1.79
SEMA3DO95025 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.87□□□□□ -1.79
SEMA3DO95025 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.87□□□□□ -1.79
SEMA3DO95025 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms