Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3□□□□□ -1.93
SSSCA1O60232 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3□□□□□ -1.93
SSSCA1O60232 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3□□□□□ -1.93
SSSCA1O60232 AC006539.3-201ENST00000454258 129 ntBASIC3□□□□□ -1.93
SSSCA1O60232 RPL23AP73-201ENST00000492507 471 ntBASIC3□□□□□ -1.93
SSSCA1O60232 RPS4XP14-201ENST00000493072 781 ntBASIC3□□□□□ -1.93
SSSCA1O60232 FCF1P3-201ENST00000496394 590 ntBASIC3□□□□□ -1.93
SSSCA1O60232 NDUFA5P12-201ENST00000503796 343 ntBASIC3□□□□□ -1.93
SSSCA1O60232 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3□□□□□ -1.93
SSSCA1O60232 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3□□□□□ -1.93
SSSCA1O60232 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3□□□□□ -1.93
SSSCA1O60232 RNA5SP309-201ENST00000516670 106 ntBASIC3□□□□□ -1.93
SSSCA1O60232 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3□□□□□ -1.93
SSSCA1O60232 NDUFA5P2-201ENST00000519723 344 ntBASIC3□□□□□ -1.93
SSSCA1O60232 KCTD9P6-201ENST00000522306 950 ntBASIC3□□□□□ -1.93
SSSCA1O60232 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SSSCA1O60232 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SSSCA1O60232 AL121766.1-201ENST00000547436 487 ntBASIC3□□□□□ -1.93
SSSCA1O60232 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3□□□□□ -1.93
SSSCA1O60232 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3□□□□□ -1.93
SSSCA1O60232 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3□□□□□ -1.93
SSSCA1O60232 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3□□□□□ -1.93
SSSCA1O60232 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3□□□□□ -1.93
SSSCA1O60232 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3□□□□□ -1.93
SSSCA1O60232 AL049539.1-201ENST00000611964 459 ntBASIC3□□□□□ -1.93
SSSCA1O60232 AC023043.4-201ENST00000612081 449 ntBASIC3□□□□□ -1.93
SSSCA1O60232 MIR6862-1-201ENST00000613016 70 ntBASIC3□□□□□ -1.93
SSSCA1O60232 MIR6862-2-201ENST00000614755 70 ntBASIC3□□□□□ -1.93
SSSCA1O60232 AL391261.4-201ENST00000616012 481 ntBASIC3□□□□□ -1.93
SSSCA1O60232 AL121890.3-201ENST00000618494 516 ntBASIC3□□□□□ -1.93
SSSCA1O60232 MIR7703-201ENST00000620784 77 ntBASIC3□□□□□ -1.93
SSSCA1O60232 AP001784.1-201ENST00000624107 428 ntBASIC3□□□□□ -1.93
SSSCA1O60232 AC020978.9-201ENST00000624380 1141 ntBASIC3□□□□□ -1.93
SSSCA1O60232 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3□□□□□ -1.93
SSSCA1O60232 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3□□□□□ -1.93
SSSCA1O60232 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
SSSCA1O60232 SAGE2P-201ENST00000420011 2126 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SSSCA1O60232 AC066616.2-201ENST00000559334 1481 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 AC139713.2-214ENST00000642059 1811 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SSSCA1O60232 RPS27AP11-201ENST00000402798 447 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SSSCA1O60232 RNU6-55P-201ENST00000411092 107 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 RNU6-954P-201ENST00000411355 107 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 LIPT1P1-201ENST00000415870 1186 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 SLC4A1APP1-201ENST00000419995 602 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 RPL12P34-201ENST00000424532 479 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 MTND4LP13-201ENST00000425022 298 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 AC017083.1-201ENST00000428093 483 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.99□□□□□ -1.93
SSSCA1O60232 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC2.99□□□□□ -1.93
SSSCA1O60232 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.99□□□□□ -1.93
SSSCA1O60232 RPS4XP22-201ENST00000480755 780 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 METTL15P1-201ENST00000481421 1045 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 RPS3AP6-201ENST00000484430 795 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SSSCA1O60232 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.99□□□□□ -1.93
SSSCA1O60232 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.99□□□□□ -1.93
SSSCA1O60232 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC2.99□□□□□ -1.93
SSSCA1O60232 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.99□□□□□ -1.93
SSSCA1O60232 AC011602.1-201ENST00000546484 331 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.99□□□□□ -1.93
SSSCA1O60232 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.99□□□□□ -1.93
SSSCA1O60232 AP005901.4-201ENST00000577336 569 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.99□□□□□ -1.93
SSSCA1O60232 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 SNORA62.6-201ENST00000606322 83 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC2.99□□□□□ -1.93
SSSCA1O60232 AC114781.5-201ENST00000615297 108 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 CDRT1-208ENST00000630868 794 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 MIR7153-201ENST00000637758 57 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 AL732372.2-225ENST00000642124 456 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SSSCA1O60232 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.99□□□□□ -1.93
SSSCA1O60232 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SSSCA1O60232 AC073429.2-201ENST00000569694 1444 ntBASIC2.99□□□□□ -1.93
SSSCA1O60232 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.98□□□□□ -1.93
SSSCA1O60232 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSSCA1O60232 AC106871.1-201ENST00000568324 3102 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSSCA1O60232 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SSSCA1O60232 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 RNVU1-6-201ENST00000364688 164 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 RNU6-398P-201ENST00000384143 109 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.98□□□□□ -1.93
SSSCA1O60232 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.98□□□□□ -1.93
SSSCA1O60232 AL590139.1-201ENST00000416267 400 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 RPL31P12-201ENST00000422587 358 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 COX6CP15-201ENST00000426313 211 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.98□□□□□ -1.93
SSSCA1O60232 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.98□□□□□ -1.93
SSSCA1O60232 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.98□□□□□ -1.93
SSSCA1O60232 RPL35AP28-201ENST00000459730 331 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.98□□□□□ -1.93
SSSCA1O60232 HMGB3P14-201ENST00000494195 599 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 AC093840.1-201ENST00000511599 336 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 RNA5SP164-201ENST00000516533 110 ntBASIC2.98□□□□□ -1.93
SSSCA1O60232 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC2.98□□□□□ -1.93
SSSCA1O60232 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms