Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC124068.1-201ENST00000563131 678 ntBASIC3.66□□□□□ -1.82
SGCEO43556 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.66□□□□□ -1.82
SGCEO43556 NF1P5-201ENST00000588287 448 ntBASIC3.66□□□□□ -1.82
SGCEO43556 AC010680.4-201ENST00000605334 543 ntBASIC3.66□□□□□ -1.82
SGCEO43556 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.66□□□□□ -1.82
SGCEO43556 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.66□□□□□ -1.82
SGCEO43556 AC064801.1-201ENST00000612025 407 ntBASIC3.66□□□□□ -1.82
SGCEO43556 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SGCEO43556 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.66□□□□□ -1.82
SGCEO43556 RPS4XP5-202ENST00000449995 1334 ntBASIC3.66□□□□□ -1.82
SGCEO43556 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.66□□□□□ -1.82
SGCEO43556 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SGCEO43556 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
SGCEO43556 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.65□□□□□ -1.82
SGCEO43556 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.65□□□□□ -1.82
SGCEO43556 AC138393.1-206ENST00000540997 1886 ntBASIC3.65□□□□□ -1.82
SGCEO43556 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SGCEO43556 AL359715.4-201ENST00000606629 1436 ntBASIC3.65□□□□□ -1.83
SGCEO43556 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SGCEO43556 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SGCEO43556 RNA5SP366-201ENST00000365454 123 ntBASIC3.65□□□□□ -1.83
SGCEO43556 RN7SKP182-201ENST00000410772 298 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.65□□□□□ -1.83
SGCEO43556 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.65□□□□□ -1.83
SGCEO43556 USP9YP7-201ENST00000436723 430 ntBASIC3.65□□□□□ -1.83
SGCEO43556 ARL5AP3-201ENST00000439327 386 ntBASIC3.65□□□□□ -1.83
SGCEO43556 MTCYBP12-201ENST00000440559 1134 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.65□□□□□ -1.83
SGCEO43556 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.65□□□□□ -1.83
SGCEO43556 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.65□□□□□ -1.83
SGCEO43556 EIF2S2P2-201ENST00000447161 982 ntBASIC3.65□□□□□ -1.83
SGCEO43556 TPT1P13-201ENST00000449760 499 ntBASIC3.65□□□□□ -1.83
SGCEO43556 USP9YP32-201ENST00000452432 430 ntBASIC3.65□□□□□ -1.83
SGCEO43556 RPL36AP13-201ENST00000457490 317 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AC018635.1-201ENST00000468292 1030 ntBASIC3.65□□□□□ -1.83
SGCEO43556 RPL7L1P8-201ENST00000469911 741 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AC006463.2-201ENST00000473326 348 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AF213884.1-201ENST00000488102 463 ntBASIC3.65□□□□□ -1.83
SGCEO43556 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.65□□□□□ -1.83
SGCEO43556 RPL7P47-201ENST00000497299 556 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.65□□□□□ -1.83
SGCEO43556 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.65□□□□□ -1.83
SGCEO43556 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.65□□□□□ -1.83
SGCEO43556 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SGCEO43556 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.65□□□□□ -1.83
SGCEO43556 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.65□□□□□ -1.83
SGCEO43556 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.65□□□□□ -1.83
SGCEO43556 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.65□□□□□ -1.83
SGCEO43556 AL049874.4-201ENST00000557593 255 ntBASIC3.65□□□□□ -1.83
SGCEO43556 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.65□□□□□ -1.83
SGCEO43556 AC067852.4-201ENST00000590314 478 ntBASIC3.65□□□□□ -1.83
SGCEO43556 IPO5P1-202ENST00000600039 287 ntBASIC3.65□□□□□ -1.83
SGCEO43556 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SGCEO43556 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.65□□□□□ -1.83
SGCEO43556 BX323046.1-201ENST00000610145 535 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AL713922.2-201ENST00000619384 716 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AC011944.2-201ENST00000624440 683 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AC008785.1-201ENST00000624475 456 ntBASIC3.65□□□□□ -1.83
SGCEO43556 AP005264.7-201ENST00000625003 745 ntBASIC3.65□□□□□ -1.83
SGCEO43556 OR5AC4P-202ENST00000642086 985 ntBASIC3.65□□□□□ -1.83
SGCEO43556 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SGCEO43556 NOL8P1-201ENST00000508336 3529 ntBASIC3.65□□□□□ -1.83
SGCEO43556 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SGCEO43556 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.65□□□□□ -1.83
SGCEO43556 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.64□□□□□ -1.83
SGCEO43556 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SGCEO43556 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.64□□□□□ -1.83
SGCEO43556 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SGCEO43556 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 MIR383-201ENST00000362257 73 ntBASIC3.64□□□□□ -1.83
SGCEO43556 RNU6-386P-201ENST00000362650 107 ntBASIC3.64□□□□□ -1.83
SGCEO43556 RNU1-32P-201ENST00000363937 159 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AC136624.1-201ENST00000400791 413 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AP000357.1-201ENST00000409926 1165 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.64□□□□□ -1.83
SGCEO43556 RPS12P23-201ENST00000419579 400 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AL592293.2-201ENST00000422292 996 ntBASIC3.64□□□□□ -1.83
SGCEO43556 COX6B1P7-201ENST00000430845 235 ntBASIC3.64□□□□□ -1.83
SGCEO43556 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.64□□□□□ -1.83
SGCEO43556 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.64□□□□□ -1.83
SGCEO43556 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.64□□□□□ -1.83
SGCEO43556 HMGN1P8-201ENST00000463578 288 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AC109327.1-201ENST00000471666 403 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AC041039.1-201ENST00000485656 536 ntBASIC3.64□□□□□ -1.83
SGCEO43556 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 AC108475.1-201ENST00000507880 950 ntBASIC3.64□□□□□ -1.83
SGCEO43556 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SGCEO43556 AC099522.1-202ENST00000514718 367 ntBASIC3.64□□□□□ -1.83
SGCEO43556 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.64□□□□□ -1.83
SGCEO43556 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.64□□□□□ -1.83
SGCEO43556 RAB9BP1-201ENST00000519581 626 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.64□□□□□ -1.83
SGCEO43556 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.64□□□□□ -1.83
SGCEO43556 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.64□□□□□ -1.83
SGCEO43556 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.64□□□□□ -1.83
SGCEO43556 AC022655.2-201ENST00000577280 318 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms