Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RNU4-4P-201ENST00000364588 130 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 MIR589-201ENST00000385238 99 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 AC136624.1-201ENST00000400791 413 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 HNRNPDP2-201ENST00000406475 478 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH17O14917 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH17O14917 YWHAZP7-201ENST00000436906 631 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 MTCYBP34-201ENST00000439552 670 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 AC073648.4-201ENST00000442655 781 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH17O14917 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH17O14917 NF1P3-201ENST00000457709 450 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH17O14917 MTND1P16-201ENST00000465177 898 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.87□□□□□ -1.63
PCDH17O14917 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDH17O14917 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 AC010486.2-201ENST00000505572 483 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 AC025674.1-201ENST00000507074 324 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDH17O14917 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 MRPS33P3-201ENST00000513456 322 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH17O14917 AC105185.1-201ENST00000518705 535 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH17O14917 HIGD1AP5-201ENST00000529959 259 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH17O14917 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDH17O14917 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.87□□□□□ -1.63
PCDH17O14917 AL031281.1-201ENST00000604049 488 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDH17O14917 EIF3FP1-201ENST00000613970 806 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.87□□□□□ -1.63
PCDH17O14917 AC026634.1-201ENST00000634369 198 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 Z95327.2-201ENST00000414579 1873 ntBASIC4.87□□□□□ -1.63
PCDH17O14917 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDH17O14917 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
PCDH17O14917 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDH17O14917 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PCDH17O14917 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH17O14917 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH17O14917 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH17O14917 AC100778.3-201ENST00000580060 1750 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PCDH17O14917 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH17O14917 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PCDH17O14917 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH17O14917 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH17O14917 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH17O14917 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH17O14917 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH17O14917 DDX18P3-201ENST00000404856 2007 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AL451142.2-201ENST00000429076 2090 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH17O14917 RNU6-492P-201ENST00000363035 104 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH17O14917 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH17O14917 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH17O14917 RPL23AP47-201ENST00000408017 460 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AL161449.1-201ENST00000414531 1199 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AC019050.1-201ENST00000418508 492 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AC008280.1-201ENST00000418851 412 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDH17O14917 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH17O14917 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH17O14917 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH17O14917 SKP1P3-201ENST00000429280 487 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AL513175.1-201ENST00000431492 780 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AC023347.2-201ENST00000433994 462 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH17O14917 HMGB3P9-201ENST00000441799 583 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 RAB11AP1-201ENST00000442978 646 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AC092647.3-201ENST00000443044 633 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH17O14917 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH17O14917 ART2BP-201ENST00000453501 499 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH17O14917 OR52A4P-201ENST00000472867 958 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AC010683.1-201ENST00000473673 378 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 RN7SL860P-201ENST00000473738 223 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDH17O14917 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDH17O14917 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH17O14917 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.86□□□□□ -1.63
PCDH17O14917 SOD1P3-201ENST00000518682 454 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDH17O14917 GCSHP4-201ENST00000538792 439 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AC006349.1-201ENST00000555526 235 ntBASIC4.86□□□□□ -1.63
PCDH17O14917 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.86□□□□□ -1.63
PCDH17O14917 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms