Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RAB9AP5-201ENST00000437794 597 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 RAB9AP2-201ENST00000443911 597 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 AL035551.1-201ENST00000446931 348 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.21□□□□□ -1.9
SDCBPO00560 AC114755.5-201ENST00000447760 831 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 RPS23P7-201ENST00000466210 444 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SDCBPO00560 AC084198.1-201ENST00000477747 402 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 RPS3AP6-201ENST00000484430 795 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 RWDD4P1-201ENST00000488019 565 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.21□□□□□ -1.9
SDCBPO00560 RNA5SP208-201ENST00000516156 78 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.21□□□□□ -1.9
SDCBPO00560 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.21□□□□□ -1.9
SDCBPO00560 NPM1P47-201ENST00000560843 856 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.21□□□□□ -1.9
SDCBPO00560 AC120057.2-201ENST00000571520 271 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.21□□□□□ -1.9
SDCBPO00560 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.21□□□□□ -1.9
SDCBPO00560 AL136295.6-201ENST00000610486 658 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 MIR6867-201ENST00000610636 67 ntBASIC3.21□□□□□ -1.9
SDCBPO00560 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SDCBPO00560 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.21□□□□□ -1.9
SDCBPO00560 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.21□□□□□ -1.9
SDCBPO00560 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.21□□□□□ -1.9
SDCBPO00560 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.2□□□□□ -1.9
SDCBPO00560 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SDCBPO00560 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SDCBPO00560 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.2□□□□□ -1.9
SDCBPO00560 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SDCBPO00560 AC126755.2-208ENST00000327792 462 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 AC138969.1-213ENST00000331436 462 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 RNU1-87P-201ENST00000363727 170 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 MIR141-201ENST00000384975 95 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.2□□□□□ -1.9
SDCBPO00560 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.2□□□□□ -1.9
SDCBPO00560 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.2□□□□□ -1.9
SDCBPO00560 MTCO1P51-201ENST00000427672 1060 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.2□□□□□ -1.9
SDCBPO00560 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.2□□□□□ -1.9
SDCBPO00560 AC009220.1-201ENST00000451614 275 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.2□□□□□ -1.9
SDCBPO00560 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.2□□□□□ -1.9
SDCBPO00560 AC106872.2-201ENST00000494303 480 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.2□□□□□ -1.9
SDCBPO00560 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.2□□□□□ -1.9
SDCBPO00560 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.2□□□□□ -1.9
SDCBPO00560 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SDCBPO00560 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.2□□□□□ -1.9
SDCBPO00560 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.2□□□□□ -1.9
SDCBPO00560 AL133247.2-201ENST00000603236 482 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 AL137849.1-201ENST00000604767 169 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 AL592436.1-201ENST00000605135 558 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 AC090948.2-201ENST00000607363 564 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SDCBPO00560 MIR6500-201ENST00000622700 86 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 AC020763.5-201ENST00000623298 430 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 AC073530.2-201ENST00000623987 261 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.2□□□□□ -1.9
SDCBPO00560 AC009229.4-201ENST00000623854 1947 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SDCBPO00560 AC095050.2-201ENST00000510748 1458 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SDCBPO00560 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SDCBPO00560 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SDCBPO00560 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SDCBPO00560 CASC19-284ENST00000642142 1868 ntBASIC3.2□□□□□ -1.9
SDCBPO00560 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDCBPO00560 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SDCBPO00560 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDCBPO00560 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SDCBPO00560 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDCBPO00560 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SDCBPO00560 SNORA62-201ENST00000365493 153 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SDCBPO00560 OR13C3-201ENST00000374781 1108 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 RNU6-1279P-201ENST00000383917 103 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDCBPO00560 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDCBPO00560 RPL30P2-201ENST00000414021 291 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.19□□□□□ -1.9
SDCBPO00560 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.19□□□□□ -1.9
SDCBPO00560 AL162151.2-201ENST00000448875 158 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 NANOGP10-201ENST00000453325 895 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.19□□□□□ -1.9
SDCBPO00560 AC005229.2-201ENST00000456995 399 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.19□□□□□ -1.9
SDCBPO00560 IGHV3-32-201ENST00000519182 355 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 YPEL5P3-201ENST00000547227 352 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 AC068446.3-201ENST00000555285 382 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.19□□□□□ -1.9
SDCBPO00560 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.19□□□□□ -1.9
SDCBPO00560 AC244505.7-201ENST00000599675 272 ntBASIC3.19□□□□□ -1.9
SDCBPO00560 Z82195.1-201ENST00000604558 398 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms