Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 HMGB1P30-201ENST00000492455 606 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CFAP99D6REC4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 DEFB109D-201ENST00000529497 240 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 SSU72P6-201ENST00000532644 488 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC007537.1-201ENST00000539347 327 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AL118558.2-201ENST00000556294 238 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AF038458.1-201ENST00000588406 262 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC243654.2-201ENST00000612843 443 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AP005212.3-201ENST00000619964 528 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC012629.3-201ENST00000623397 328 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC008626.2-201ENST00000624425 248 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.9□□□□□ -1.3
CFAP99D6REC4 AC027559.1-201ENST00000636288 271 ntBASIC6.9□□□□□ -1.3
CFAP99D6REC4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CFAP99D6REC4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.9□□□□□ -1.31
CFAP99D6REC4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.9□□□□□ -1.31
CFAP99D6REC4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
CFAP99D6REC4 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
CFAP99D6REC4 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
CFAP99D6REC4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
CFAP99D6REC4 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.9□□□□□ -1.31
CFAP99D6REC4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CFAP99D6REC4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CFAP99D6REC4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CFAP99D6REC4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CFAP99D6REC4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CFAP99D6REC4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CFAP99D6REC4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
CFAP99D6REC4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 AC105749.1-201ENST00000631338 2008 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 RNU6-1115P-201ENST00000362490 106 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 RNA5SP258-201ENST00000362750 119 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 Y_RNA.378-201ENST00000365652 113 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 RNU6-641P-201ENST00000384006 107 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 AL391419.1-201ENST00000398901 1275 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 SSXP10-201ENST00000402595 565 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 HMGB3P2-201ENST00000411913 584 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 AL139135.1-201ENST00000412675 209 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 AL160004.2-201ENST00000432935 350 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 YWHAEP1-201ENST00000453697 763 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 AC005229.2-201ENST00000456995 399 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 MIR2053-201ENST00000459295 91 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 RPS16P9-201ENST00000477220 427 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 AC021382.1-201ENST00000483523 359 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 RN7SL849P-201ENST00000485236 295 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 AC100784.1-201ENST00000522790 310 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 AC091932.1-201ENST00000569381 427 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 AL162373.1-201ENST00000620433 407 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 AC098657.3-201ENST00000620434 263 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 DHX40P1-201ENST00000588725 1412 ntBASIC6.89□□□□□ -1.31
CFAP99D6REC4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
CFAP99D6REC4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CFAP99D6REC4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CFAP99D6REC4 AL359195.2-201ENST00000623657 4412 ntBASIC6.88□□□□□ -1.31
CFAP99D6REC4 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CFAP99D6REC4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CFAP99D6REC4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.88□□□□□ -1.31
CFAP99D6REC4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
CFAP99D6REC4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CFAP99D6REC4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CFAP99D6REC4 LINC02019-201ENST00000608605 2060 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms