Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 AC079587.1-201ENST00000603846 277 ntBASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 AC024940.4-201ENST00000605507 246 ntBASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 AP003117.2-201ENST00000606010 545 ntBASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 AC116651.1-201ENST00000609724 556 ntBASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 AL713922.2-201ENST00000619384 716 ntBASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 AC004943.3-201ENST00000624116 600 ntBASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.25□□□□□ -1.89
RBFOX3A6NFN3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 RN7SKP149-201ENST00000363008 344 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 DHFRP5-201ENST00000406944 564 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 SNRPFP1-201ENST00000414761 252 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AL512504.1-201ENST00000415494 778 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC007559.1-201ENST00000428736 355 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AL353093.1-201ENST00000441292 436 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 RPL34P26-201ENST00000445636 354 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 RPL31P44-201ENST00000447680 377 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 RPS3AP53-201ENST00000454716 778 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 SNORD108-201ENST00000459332 71 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC091917.2-201ENST00000505002 744 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC093770.1-201ENST00000511559 571 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC110775.1-201ENST00000513721 462 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC021006.3-201ENST00000530771 192 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC008033.2-201ENST00000542626 177 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 MIR4330-201ENST00000579077 105 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC022387.2-201ENST00000604050 448 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AL031320.1-201ENST00000604177 357 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AL391261.4-201ENST00000616012 481 ntBASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RBFOX3A6NFN3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 SDAD1P1-202ENST00000524156 2051 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 RNU6-452P-201ENST00000384406 107 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 MIR937-201ENST00000401271 86 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 RPL37P18-201ENST00000411602 243 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC004074.1-201ENST00000421810 1063 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 ELOCP11-201ENST00000436690 332 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 SKP1P1-201ENST00000438081 489 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 YWHAZP2-201ENST00000440317 728 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 XKRYP6-201ENST00000440468 1116 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 XKRYP3-201ENST00000442113 1116 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 ELOCP16-201ENST00000444494 332 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 MORF4L1P4-201ENST00000450245 976 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 HMGB1P5-202ENST00000451497 985 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AP002345.1-201ENST00000456493 928 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 RPL35AP28-201ENST00000459730 331 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 RPS29P19-201ENST00000479709 171 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC231760.1-201ENST00000498002 260 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AP002812.4-201ENST00000532139 286 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms