Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 YWHAZP6-201ENST00000399764 738 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 RAB9AP4-201ENST00000415230 609 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 RPL34P3-201ENST00000421454 338 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AP001324.1-201ENST00000428553 399 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 CYCSP6-201ENST00000434498 302 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 SERPINA7P1-201ENST00000443077 631 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC009244.1-201ENST00000450566 258 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 SSXP4-201ENST00000451349 245 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 OR6K1P-201ENST00000456766 971 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC091564.1-201ENST00000464563 479 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 RN7SL445P-201ENST00000495609 293 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC105391.1-201ENST00000503155 1045 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 SCARNA22-201ENST00000503991 125 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 MRPS33P2-201ENST00000507850 322 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 IGHVII-44-2-201ENST00000517728 250 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC126177.5-201ENST00000549599 178 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 SETP2-201ENST00000553886 926 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 VN1R81P-201ENST00000602085 372 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC027243.2-201ENST00000602530 724 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AL137849.1-201ENST00000604767 169 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC025175.1-201ENST00000606482 759 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AL627309.6-201ENST00000606857 840 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC069234.5-201ENST00000611056 416 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC090617.7-201ENST00000623952 126 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC011978.2-201ENST00000569835 2054 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 EIF2AP4-201ENST00000424793 1781 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RPL7P26-201ENST00000333817 754 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 HMGB3P18-201ENST00000406327 590 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RN7SKP222-201ENST00000410651 315 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RPL7P10-201ENST00000417407 739 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AC006960.1-201ENST00000419980 153 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RPS3P2-201ENST00000421346 701 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AL513174.1-201ENST00000423182 629 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AL390023.1-201ENST00000428836 262 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 MRPS18BP2-201ENST00000434310 759 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 HMGB1P45-201ENST00000435986 653 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RPL7P11-201ENST00000437586 658 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RPL23AP46-201ENST00000438548 490 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 CR391992.1-201ENST00000438601 394 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AC144530.1-201ENST00000452862 555 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AC092647.2-201ENST00000452998 253 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RPL31P11-202ENST00000454082 372 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AURKAPS2-201ENST00000454983 333 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AC006511.1-201ENST00000470614 315 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AC084198.1-201ENST00000477747 402 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 PDPN-205ENST00000487038 607 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AP000563.1-201ENST00000490865 758 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RN7SKP244-201ENST00000516513 307 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RN7SKP82-201ENST00000516786 223 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 MIR2276-201ENST00000516886 89 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 RNU6-56P-201ENST00000516986 93 ntBASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.92□□□□□ -2.1
LINC01558Q9Y6Z2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms