Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MIR4675-201ENST00000577898 77 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC020910.3-201ENST00000603701 874 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC092140.2-201ENST00000618027 521 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC022106.2-201ENST00000620114 757 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC007490.1-201ENST00000624321 703 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 GTF2H2B-203ENST00000508065 1432 ntBASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
SSX2IPQ9Y2D8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL034370.1-201ENST00000397254 1590 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 DDX18P3-201ENST00000404856 2007 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC100778.3-201ENST00000580060 1750 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 RNU1-32P-201ENST00000363937 159 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 SNORD116.1-201ENST00000365628 92 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 SNORA40.2-201ENST00000390847 128 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL079342.2-201ENST00000403367 482 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL034374.1-201ENST00000406329 351 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 RNU4-72P-201ENST00000410754 173 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC092017.2-201ENST00000427600 362 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL390023.1-201ENST00000428836 262 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 MOB1AP1-201ENST00000430903 535 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 BX323845.1-201ENST00000432417 179 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 FTH1P16-201ENST00000435241 552 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL591473.1-201ENST00000464297 313 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 RPF2P2-201ENST00000504693 896 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 MRPS33P2-201ENST00000507850 322 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 FABP5P12-201ENST00000515543 389 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC083923.1-201ENST00000523708 376 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AP003392.5-201ENST00000607857 415 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC019206.1-201ENST00000621938 425 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 MIR6810-201ENST00000622701 70 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC012414.7-202ENST00000622705 1090 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC067852.7-201ENST00000623270 535 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AP000676.3-201ENST00000623299 569 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC103706.2-201ENST00000638080 240 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC073869.10-201ENST00000642016 354 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AC006042.3-201ENST00000454684 1469 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 AL022393.1-201ENST00000625142 1677 ntBASIC5.3□□□□□ -1.56
SSX2IPQ9Y2D8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 ECM1P2-201ENST00000503354 1577 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC000367.1-201ENST00000452711 1766 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AL450345.1-202ENST00000605741 3881 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 MIR525-201ENST00000384978 85 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 BX510359.2-201ENST00000417920 305 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 MTND4P20-201ENST00000424125 869 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC068287.1-201ENST00000430283 295 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 NRBF2P3-201ENST00000432731 865 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 COX7BP2-201ENST00000437976 242 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 HMGB3P9-201ENST00000441799 583 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms