Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC073581.1-201ENST00000519036 575 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 PHBP17-201ENST00000528576 541 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 IGBP1P1-201ENST00000554337 1009 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC009117.1-201ENST00000563948 554 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC006504.6-201ENST00000590142 199 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC104785.1-201ENST00000603220 588 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AL133215.3-201ENST00000609801 448 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 OR1N1-202ENST00000619659 939 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AC026634.1-201ENST00000634369 198 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 TPTEP1-208ENST00000636884 213 ntBASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
ZC3H4Q9UPT8 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 VPS35P1-201ENST00000563400 1518 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 SELENOWP1-201ENST00000322792 252 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 RNA5SP507-201ENST00000363603 121 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 RNU6-738P-201ENST00000384531 106 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 DPPA2P2-201ENST00000418220 897 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 MTCO2P5-201ENST00000422621 426 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AL445669.1-201ENST00000426743 755 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 CBWD4P-201ENST00000445695 655 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AC108161.1-201ENST00000461060 402 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AC013356.1-201ENST00000489027 564 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AC103851.1-201ENST00000506833 274 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 IGKV2D-10-201ENST00000520194 281 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 OR5D15P-201ENST00000531671 942 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 uc_338.5-201ENST00000611839 155 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AL592429.1-201ENST00000403909 1473 ntBASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ZC3H4Q9UPT8 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC025809.2-201ENST00000625085 1802 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC007485.2-201ENST00000623493 1667 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC024560.2-201ENST00000507981 1497 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RN7SKP103-201ENST00000363848 320 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AL023284.3-201ENST00000407767 334 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RPL12P9-201ENST00000412942 488 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RPL23AP27-201ENST00000415161 451 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RPL26P29-201ENST00000415623 438 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RPL7P57-201ENST00000423238 740 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC091685.2-201ENST00000454924 864 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RN7SL269P-201ENST00000467795 305 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 AC091965.3-201ENST00000506236 208 ntBASIC7.42□□□□□ -1.22
ZC3H4Q9UPT8 RNU7-30P-201ENST00000516835 62 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms