Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 HMGB3P9-201ENST00000441799 583 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AL121834.1-201ENST00000572284 509 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AL161756.2-201ENST00000604597 246 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 MIR6868-201ENST00000611215 58 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AC233309.1-201ENST00000619522 751 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 UBE3AP2-201ENST00000429033 2259 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 SNORA79B-201ENST00000410557 148 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 RPS12P5-201ENST00000423449 371 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 ELOCP18-201ENST00000434209 337 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AC091153.1-201ENST00000466297 402 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 IGKV2D-19-201ENST00000523346 262 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AL606490.9-201ENST00000603331 271 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AC112230.1-201ENST00000604342 547 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AC022893.2-201ENST00000564832 3296 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 SNORA60-201ENST00000362396 134 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 RNA5SP51-201ENST00000364750 119 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AC068533.1-201ENST00000418542 415 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 YME1L1P1-201ENST00000429435 297 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 ARL4AP4-201ENST00000434170 518 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 SLC25A15P5-201ENST00000508033 253 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AC026726.1-201ENST00000512859 601 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 RNU7-143P-201ENST00000516781 65 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AL158196.1-201ENST00000616786 434 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AL773545.4-201ENST00000637262 310 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 AL513478.4-201ENST00000641636 310 ntBASIC3.65□□□□□ -1.82
CCDC88CQ9P219 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC88CQ9P219 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 RNA5SP322-201ENST00000363617 119 ntBASIC3.65□□□□□ -1.83
CCDC88CQ9P219 ATP5F1P3-201ENST00000397213 657 ntBASIC3.65□□□□□ -1.83
CCDC88CQ9P219 PTMAP2-201ENST00000397627 327 ntBASIC3.65□□□□□ -1.83
CCDC88CQ9P219 BMS1P19-201ENST00000433925 393 ntBASIC3.65□□□□□ -1.83
CCDC88CQ9P219 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 AC010460.1-201ENST00000507087 466 ntBASIC3.65□□□□□ -1.83
CCDC88CQ9P219 LDHBP3-201ENST00000514909 822 ntBASIC3.65□□□□□ -1.83
CCDC88CQ9P219 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC88CQ9P219 CYP1D1P-201ENST00000416662 1433 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 ZNF603P-201ENST00000405613 487 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AC114814.2-201ENST00000419195 485 ntBASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC88CQ9P219 AC006946.1-201ENST00000429106 328 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms