Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 RNU4-25P-201ENST00000410569 230 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 RNA5SP39-201ENST00000411245 120 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC004690.1-201ENST00000418216 328 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 PTP4A1P7-201ENST00000423476 514 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 COX6B1P7-201ENST00000430845 235 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AL358472.1-201ENST00000431295 329 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 RPS7P2-201ENST00000435134 607 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 ACTR3P2-201ENST00000439585 1257 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 RPL36AP13-201ENST00000457490 317 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC107398.1-201ENST00000486904 505 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 RPL31P61-201ENST00000496160 376 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC096571.1-202ENST00000506634 735 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 SUMO2P5-201ENST00000506790 245 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC108475.1-201ENST00000507880 950 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 IGHV3-63-201ENST00000518422 341 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 MYL12AP1-201ENST00000518490 515 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC010376.1-201ENST00000522101 334 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC021451.1-201ENST00000523498 1129 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 OR7E13P-201ENST00000526052 910 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC118942.1-201ENST00000529674 1035 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC087888.1-201ENST00000550884 1254 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 RPL23AP87-202ENST00000573039 466 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 MIR4277-201ENST00000578298 84 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC245100.7-201ENST00000609678 442 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 VN1R9P-201ENST00000614184 867 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AL158062.1-201ENST00000619632 745 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AP000770.2-201ENST00000623694 100 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC073429.2-201ENST00000569694 1444 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 MFSD8-213ENST00000641134 1327 ntBASIC4.44□□□□□ -1.7
SIX2Q9NPC8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.44□□□□□ -1.7
SIX2Q9NPC8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC006971.1-201ENST00000407916 4486 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 RNU1-32P-201ENST00000363937 159 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 SNORA3C-201ENST00000408792 125 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 RPL23AP26-201ENST00000412728 464 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 UBE2V1P9-201ENST00000414760 368 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 PTP4A1P1-201ENST00000420539 515 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC011742.1-201ENST00000431448 434 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 MTCYBP12-201ENST00000440559 1134 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 CEACAMP9-201ENST00000442990 513 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC069540.1-201ENST00000446320 988 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 CALM1P2-201ENST00000452941 448 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 DUXAP8-207ENST00000456786 622 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 RPS20P4-201ENST00000461659 355 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC091167.1-201ENST00000492017 396 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 TPT1P3-201ENST00000492841 512 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC025445.1-201ENST00000502728 300 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC008427.1-201ENST00000503102 655 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC025459.1-201ENST00000504072 156 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC139783.2-201ENST00000504847 1145 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 SNORD39.2-201ENST00000579995 76 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AP000919.1-202ENST00000581139 1264 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 MIR3138-201ENST00000585238 82 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AC013244.3-201ENST00000605614 388 ntBASIC4.43□□□□□ -1.7
SIX2Q9NPC8 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms