Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 Y_RNA.481-201ENST00000384373 102 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 OR9R1P-201ENST00000412200 877 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC099677.3-201ENST00000427081 395 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 RSU1P2-202ENST00000437884 485 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC016027.4-201ENST00000450866 277 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC006539.1-201ENST00000481419 501 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC109481.1-201ENST00000509173 282 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 GAPDHP62-201ENST00000515313 990 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC034268.2-201ENST00000571784 482 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC068790.5-201ENST00000602741 355 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC012511.1-201ENST00000608140 449 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC103564.3-201ENST00000621194 220 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 AP006248.2-201ENST00000623309 592 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 CASC19-246ENST00000641625 1606 ntBASIC5.91□□□□□ -1.46
SSU72Q9NP77 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSU72Q9NP77 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSU72Q9NP77 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSU72Q9NP77 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC108467.2-201ENST00000617640 1597 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC090229.1-201ENST00000590983 1609 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 AL512646.1-201ENST00000269395 1077 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 Y_RNA.166-201ENST00000363730 102 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 RNU6-289P-201ENST00000364093 107 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 SNORA51.2-201ENST00000364595 132 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 Y_RNA.381-201ENST00000365666 102 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSU72Q9NP77 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 RNA5SP91-201ENST00000390902 119 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 RPS20P2-201ENST00000402520 389 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 AL590290.1-201ENST00000405336 380 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 MIR320C1-201ENST00000408566 88 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 RNA5SP118-201ENST00000410385 109 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 RN7SKP39-201ENST00000410773 322 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 RNA5SP155-201ENST00000411154 129 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 AL139135.1-201ENST00000412675 209 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 ELOBP4-201ENST00000423418 296 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 RPL12P12-201ENST00000424633 501 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 ACTR3P2-201ENST00000439585 1257 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AL663074.2-201ENST00000440621 479 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 RN7SL552P-201ENST00000462094 276 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 UBA52P3-201ENST00000491303 382 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC083795.1-201ENST00000491760 320 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 MIR2117-201ENST00000516780 80 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 RNU6-835P-201ENST00000516974 104 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AF279873.1-201ENST00000523393 313 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AL389895.1-201ENST00000554127 252 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC012182.1-201ENST00000570133 895 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC015917.1-201ENST00000579654 510 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 MIR378H-201ENST00000579966 83 ntBASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.9□□□□□ -1.46
SSU72Q9NP77 AC104785.1-201ENST00000603220 588 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms