Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CHD8Q9HCK8 AL117378.2-201ENST00000622916 1337 ntBASIC3.62□□□□□ -1.83
CHD8Q9HCK8 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 Y_RNA.118-201ENST00000363300 101 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 RNU6-729P-201ENST00000384399 107 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AC007738.1-201ENST00000413892 348 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 MTND2P40-201ENST00000436718 841 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 snoU13.23-201ENST00000458863 104 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AC138409.2-202ENST00000507274 458 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 MTND1P6-201ENST00000523621 946 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AL592295.2-201ENST00000612578 206 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AC018529.3-201ENST00000624212 2254 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 OR52E3P-201ENST00000452083 936 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 RPL31P50-201ENST00000471002 296 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 RN7SL432P-201ENST00000484057 298 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AC069240.1-201ENST00000548774 375 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AC025857.2-201ENST00000602711 238 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AC125494.3-201ENST00000602759 455 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AC005034.4-201ENST00000603612 899 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AP003392.5-201ENST00000607857 415 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 AC119674.1-207ENST00000641355 633 ntBASIC3.61□□□□□ -1.83
CHD8Q9HCK8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
CHD8Q9HCK8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 RNA5SP453-201ENST00000362503 119 ntBASIC3.6□□□□□ -1.83
CHD8Q9HCK8 RPL7P36-201ENST00000444633 681 ntBASIC3.6□□□□□ -1.83
CHD8Q9HCK8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 AC022695.1-201ENST00000522089 237 ntBASIC3.6□□□□□ -1.83
CHD8Q9HCK8 AL121594.4-201ENST00000556211 1196 ntBASIC3.6□□□□□ -1.83
CHD8Q9HCK8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 AC010266.2-201ENST00000564741 3255 ntBASIC3.6□□□□□ -1.83
CHD8Q9HCK8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 SNORA70.9-201ENST00000384370 135 ntBASIC3.6□□□□□ -1.83
CHD8Q9HCK8 SNORA74C-2-201ENST00000411179 201 ntBASIC3.6□□□□□ -1.83
CHD8Q9HCK8 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 AC022893.2-201ENST00000564832 3296 ntBASIC3.6□□□□□ -1.83
CHD8Q9HCK8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHD8Q9HCK8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 SNORA9.2-201ENST00000365361 133 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AL024507.1-201ENST00000412741 274 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC005019.1-201ENST00000436455 431 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 IGKV2-38-201ENST00000517443 247 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC113192.3-201ENST00000529152 742 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AP002001.2-201ENST00000529025 1469 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 RNA5SP399-201ENST00000364003 117 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 U3.19-201ENST00000390893 196 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 RNA5SP306-201ENST00000411087 107 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AL358472.1-201ENST00000431295 329 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC124916.1-201ENST00000444020 547 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC080014.1-201ENST00000496877 1201 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.59□□□□□ -1.83
CHD8Q9HCK8 SNX6P1-201ENST00000601728 1224 ntBASIC3.59□□□□□ -1.83
CHD8Q9HCK8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms