Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 FHP1-201ENST00000442741 703 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 USP9YP17-201ENST00000444617 696 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 DDX39BP2-208ENST00000453923 258 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 RPL7P32-201ENST00000457119 744 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 RN7SL354P-201ENST00000469282 294 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 MTCO3P35-201ENST00000485582 781 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 IGLV3-26-201ENST00000520756 302 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 HMGB3P26-201ENST00000560051 582 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AC011374.2-201ENST00000607135 526 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AC096586.1-201ENST00000610267 561 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AL138721.1-201ENST00000616756 179 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AC145207.9-201ENST00000623802 325 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 AC021106.3-201ENST00000623925 531 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 OR14L1P-202ENST00000641545 3009 ntBASIC4.63□□□□□ -1.67
PCDH9Q9HC56 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
PCDH9Q9HC56 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC011155.1-201ENST00000316512 456 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC079741.1-201ENST00000321498 212 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC067945.1-201ENST00000342609 618 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 SNORD113.2-201ENST00000364166 89 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 RNU6-906P-201ENST00000384700 70 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 SNORD65C-201ENST00000390962 71 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 RPS16P5-201ENST00000406501 404 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 MTCO1P52-201ENST00000433928 531 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 MTND1P31-201ENST00000449206 961 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 OR51B8P-201ENST00000449892 769 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 VN1R32P-201ENST00000452234 905 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AL035407.2-201ENST00000454090 378 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC015795.1-201ENST00000513669 327 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 RNU6-311P-201ENST00000516224 102 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 RNU6-1028P-201ENST00000517164 93 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC025260.1-201ENST00000548858 430 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 RPL23AP97-201ENST00000568955 471 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AP002906.1-201ENST00000603405 233 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC090525.3-201ENST00000605601 189 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 BX323046.1-201ENST00000610145 535 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC079395.3-201ENST00000615161 484 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC009464.1-201ENST00000615731 469 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AL035461.2-201ENST00000619201 524 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC104985.3-201ENST00000623479 597 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AC007546.2-201ENST00000623996 360 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 AP000676.4-201ENST00000624659 623 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 MAPK10-304ENST00000641341 3984 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 MFSD8-220ENST00000641243 1422 ntBASIC4.62□□□□□ -1.67
PCDH9Q9HC56 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH9Q9HC56 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 RNU1-94P-201ENST00000362627 173 ntBASIC4.61□□□□□ -1.67
PCDH9Q9HC56 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PCDH9Q9HC56 MIR585-201ENST00000384887 94 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms