Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 FABP12P1-201ENST00000401911 322 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 HSPD1P16-201ENST00000402302 394 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 RN7SKP33-201ENST00000410942 340 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AC013404.1-201ENST00000413068 249 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 COX6CP15-201ENST00000426313 211 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 NPM1P24-201ENST00000428039 894 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 GSTA7P-201ENST00000438425 448 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AL353748.1-201ENST00000440753 474 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 NUTF2P3-201ENST00000448540 384 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AC010469.1-201ENST00000463864 576 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 RN7SL271P-201ENST00000487601 295 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 RN7SL604P-201ENST00000492589 296 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 IGBP1P5-201ENST00000507524 1000 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 MIR4716-201ENST00000579628 84 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 RN7SL600P-201ENST00000581811 299 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 MIR5684-201ENST00000585074 65 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AC012557.1-201ENST00000607115 611 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 AC016717.3-201ENST00000624730 554 ntBASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCSER1Q9C0I3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 MIR448-201ENST00000362131 111 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 SNORA70C-201ENST00000384538 135 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 SNORA3C-201ENST00000408792 125 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 RNA5SP104-201ENST00000410989 118 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 RPS20P25-201ENST00000412447 352 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 RANP4-201ENST00000413361 655 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 EIF2S2P3-201ENST00000428356 999 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AC103987.1-201ENST00000473394 348 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 MRPL49P2-201ENST00000521066 465 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AC084757.1-201ENST00000559987 490 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AL049555.1-201ENST00000562834 1933 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AC022968.1-201ENST00000567372 442 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AC011477.5-201ENST00000586571 259 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AC005261.4-201ENST00000600047 1385 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 AC020910.2-201ENST00000603635 610 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 MIR492-201ENST00000638676 116 ntBASIC4.59□□□□□ -1.67
CCSER1Q9C0I3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCSER1Q9C0I3 AL592437.2-201ENST00000421655 2434 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 SNORA60-201ENST00000362396 134 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 RNA5SP306-201ENST00000411087 107 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 RPL23AP38-201ENST00000423801 469 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AL590623.1-201ENST00000427864 105 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 RPL34P26-201ENST00000445636 354 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 NUTF2P7-201ENST00000453086 375 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 RPL7P48-201ENST00000461513 746 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 RPL7P19-201ENST00000469948 618 ntBASIC4.58□□□□□ -1.68
CCSER1Q9C0I3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms