Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SNORD39.2-201ENST00000579995 76 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AL591424.2-201ENST00000617023 128 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 CDRT1-208ENST00000630868 794 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AC074029.4-201ENST00000624796 1859 ntBASIC4.73□□□□□ -1.65
UPF3BQ9BZI7 AL161912.2-201ENST00000565707 3007 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 RNA5SP130-201ENST00000364431 114 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AC104297.1-201ENST00000393779 870 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 MIR1251-201ENST00000408552 70 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 RPSAP41-201ENST00000439695 860 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 RPL21P89-201ENST00000444021 467 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 SYT14P1-201ENST00000481459 721 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 RPS6P4-201ENST00000494693 758 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AL160281.1-201ENST00000605307 311 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AC015849.6-201ENST00000605454 474 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AC067838.1-201ENST00000606064 577 ntBASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF3BQ9BZI7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
UPF3BQ9BZI7 AC007529.1-201ENST00000418574 2178 ntBASIC4.71□□□□□ -1.65
UPF3BQ9BZI7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 MIR372-201ENST00000362225 67 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 SNORA63.1-201ENST00000362493 131 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 RNU6-1263P-201ENST00000384601 106 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 SNORA81-201ENST00000408493 178 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 KCTD9P3-201ENST00000434597 1169 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 AC096638.2-201ENST00000434965 711 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 AC016687.1-201ENST00000482574 353 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 RN7SL271P-201ENST00000487601 295 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 AC146944.2-203ENST00000502493 354 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 NPM1P41-201ENST00000512920 831 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 AC139495.1-202ENST00000513164 354 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 AC053481.4-201ENST00000583164 216 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 AL161756.2-201ENST00000604597 246 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 RMST_9.1-201ENST00000619945 193 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UPF3BQ9BZI7 LINC02471-203ENST00000641941 4752 ntBASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 MRPL50P1-201ENST00000431951 384 ntBASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 RANP8-201ENST00000444720 713 ntBASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 RPS17P13-201ENST00000448974 407 ntBASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 RPL5P32-201ENST00000454085 879 ntBASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF3BQ9BZI7 AL121839.1-201ENST00000556233 1185 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms