Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 PCNAP1-202ENST00000595299 752 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 Z99129.2-201ENST00000619967 314 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AP005901.5-201ENST00000545779 1796 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CHMP4CQ96CF2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
CHMP4CQ96CF2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CHMP4CQ96CF2 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 CYB5AP4-201ENST00000396692 399 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 RNU2-65P-201ENST00000410162 185 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 Y_RNA.625-201ENST00000411256 107 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 RPL37P18-201ENST00000411602 243 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 ELOCP9-201ENST00000418624 239 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 OR2AH1P-201ENST00000425717 928 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 DPRXP1-201ENST00000426312 460 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 NMNAT1P2-201ENST00000435192 860 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 HMGB1P48-201ENST00000446155 598 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 CYCSP34-201ENST00000458172 304 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC006511.1-201ENST00000470614 315 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC004263.1-201ENST00000479327 332 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC090686.1-201ENST00000481577 749 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC020890.1-201ENST00000491837 504 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC073358.1-201ENST00000505671 684 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 TCP11X3P-202ENST00000514289 1254 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 SNORA3.4-201ENST00000515969 96 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 MRPS36P3-201ENST00000519284 130 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC022662.1-201ENST00000580252 331 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 TUSC7.1-201ENST00000610969 165 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AL157770.1-201ENST00000623049 439 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AC019226.2-201ENST00000625973 424 ntBASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CHMP4CQ96CF2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 ZNF652P1-201ENST00000442420 1309 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 RN7SKP115-201ENST00000363177 317 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 SNORD116.1-201ENST00000365628 92 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AL078599.1-201ENST00000402075 293 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 RNU6-272P-201ENST00000411028 104 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 GTF2IP7-202ENST00000436677 309 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC104306.1-201ENST00000449702 371 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 OR52J1P-201ENST00000450596 932 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 RN7SL346P-201ENST00000491561 294 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 DYNLL1P6-201ENST00000503440 264 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC138938.1-201ENST00000515431 782 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 MRPS36P5-201ENST00000551909 298 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC145350.1-201ENST00000567426 208 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 AC008751.2-201ENST00000597885 980 ntBASIC5.82□□□□□ -1.48
CHMP4CQ96CF2 MRPS35P3-201ENST00000603189 709 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms